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129  structures 3530  species 9  interactions 14475  sequences 128  architectures

Clan: FAD-oxidase_C (CL0277)

Summary

FAD-linked oxidase C-terminal domain superfamily Add an annotation

This clan consists of a duplicated subdomain in a variety of FAD-liked oxidase/dehydrogenase enzymes.

This clan contains 6 families and the total number of domains in the clan is 14475. The clan was built by A Bateman.

Members

This clan contains the following 6 member families:

ALO BBE Chol_subst-bind Cytokin-bind FAD-oxidase_C Lact-deh-memb

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
FAD-oxidase_C (PF02913) 9445 (65.3%) View
BBE (PF08031) 2389 (16.5%) View
ALO (PF04030) 1395 (9.6%) View
Lact-deh-memb (PF09330) 896 (6.2%) View
Cytokin-bind (PF09265) 278 (1.9%) View
Chol_subst-bind (PF09129) 72 (0.5%) View
Total: 6 Total: 14475 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 9 interactions for this clan. More...

Interacting families
A B
FAD-oxidase_C FAD_binding_4
FAD-oxidase_C
Lact-deh-memb FAD_binding_4
Cytokin-bind FAD_binding_4
BBE FAD_binding_4
Chol_subst-bind FAD_binding_4
Chol_subst-bind
ALO FAD_binding_4
ALO

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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