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35  structures 3566  species 5  interactions 11834  sequences 91  architectures

Clan: KNTase_C (CL0291)

Summary

Nucleotidyltransferase substrate binding domain Add an annotation

This alpha helical domain is found associated with a variety of nucleotidyltransferase domains.

This clan contains 8 families and the total number of domains in the clan is 11834. The clan was built by A Bateman.

Members

This clan contains the following 8 member families:

DUF294_C DUF4145 DUF86 GlnD_UR_UTase HEPN KNTase_C NTase_sub_bind PaREP1

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
GlnD_UR_UTase (PF08335) 5858 (49.5%) View
DUF86 (PF01934) 1619 (13.7%) View
HEPN (PF05168) 1339 (11.3%) View
DUF294_C (PF10335) 1001 (8.5%) View
DUF4145 (PF13643) 970 (8.2%) View
PaREP1 (PF05942) 500 (4.2%) View
NTase_sub_bind (PF08780) 469 (4.0%) View
KNTase_C (PF07827) 78 (0.7%) View
Total: 8 Total: 11834 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 5 interactions for this clan. More...

Interacting families
A B
NTase_sub_bind NTase_sub_bind
HEPN HEPN
KNTase_C NTP_transf_2
KNTase_C
PaREP1 PaREP1

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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