Summary: Oxaloacetate decarboxylase, gamma chain
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Oxaloacetate decarboxylase Edit Wikipedia article
|PDB structures||RCSB PDB PDBe PDBsum|
|Gene Ontology||AmiGO / EGO|
 See also
- Bott M, Pfister K, Burda P, Kalbermatter O, Woehlke G, Dimroth P (December 1997). "Methylmalonyl-CoA decarboxylase from Propionigenium modestum--cloning and sequencing of the structural genes and purification of the enzyme complex". Eur. J. Biochem. 250 (2): 590–9. DOI:10.1111/j.1432-1033.1997.0590a.x. PMID 9428714.
- Laussermair E, Schwarz E, Oesterhelt D, Reinke H, Beyreuther K, Dimroth P (1989). "The sodium ion translocating oxaloacetate decarboxylase of Klebsiella pneumoniae. Sequence of the integral membrane-bound subunits beta and gamma.". J Biol Chem 264 (25): 14710–5. PMID 2549031.
- Schmid M, Wild MR, Dahinden P, Dimroth P (2002). "Subunit gamma of the oxaloacetate decarboxylase Na(+) pump: interaction with other subunits/domains of the complex and binding site for the Zn(2+) metal ion.". Biochemistry 41 (4): 1285–92. DOI:10.1021/bi015764l. PMID 11802728. http://www.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pubmed&tool=sumsearch.org/cite&retmode=ref&cmd=prlinks&id=11802728.
 Further reading
- Dahinden P, Auchli Y, Granjon T et al. (2005). "Oxaloacetate decarboxylase of Vibrio cholerae: purification, characterization, and expression of the genes in Escherichia coli". Arch. Microbiol. 183 (2): 121–9. DOI:10.1007/s00203-004-0754-5. PMID 15647905.
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Oxaloacetate decarboxylase, gamma chain Provide feedback
No Pfam abstract.
Schmid M, Wild MR, Dahinden P, Dimroth P; , Biochemistry 2002;41:1285-1292.: Subunit gamma of the oxaloacetate decarboxylase Na(+) pump: interaction with other subunits/domains of the complex and binding site for the Zn(2+) metal ion. PUBMED:11802728 EPMC:11802728
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR005899
This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [PUBMED:11248185].
|Cellular component||membrane (GO:0016020)|
|Molecular function||oxaloacetate decarboxylase activity (GO:0008948)|
|sodium ion transmembrane transporter activity (GO:0015081)|
|Biological process||sodium ion export (GO:0071436)|
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Curation and family details
|Seed source:||TIGRFAMs (release 2.0);|
|Author:||TIGRFAMs, Finn RD|
|Number in seed:||96|
|Number in full:||1171|
|Average length of the domain:||73.50 aa|
|Average identity of full alignment:||28 %|
|Average coverage of the sequence by the domain:||65.31 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||8|
|Download:||download the raw HMM for this family|
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