Summary: Red chlorophyll catabolite reductase (RCC reductase)
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Red chlorophyll catabolite reductase Edit Wikipedia article
In molecular biology, the red chlorophyll catabolite reductase (RCC reductase) family of proteins consists of several red chlorophyll catabolite reductase (RCC reductase) proteins. Red chlorophyll catabolite (RCC) reductase (RCCR) and pheophorbide (Pheide) a oxygenase (PaO) catalyse the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of Pheide a to a primary fluorescent catabolite (pFCC).
 Further reading
- Hörtensteiner S (2006). "Chlorophyll degradation during senescence.". Annu Rev Plant Biol 57: 55–77. doi:10.1146/annurev.arplant.57.032905.105212. PMID 16669755.
- Ougham H, Hörtensteiner S, Armstead I, Donnison I, King I, Thomas H et al. (2008). "The control of chlorophyll catabolism and the status of yellowing as a biomarker of leaf senescence.". Plant Biol (Stuttg). 10 Suppl 1: 4–14. doi:10.1111/j.1438-8677.2008.00081.x. PMID 18721307.
- Hörtensteiner S (1999). "Chlorophyll breakdown in higher plants and algae.". Cell Mol Life Sci 56 (3-4): 330–47. PMID 11212360.
Red chlorophyll catabolite reductase (RCC reductase) Provide feedback
This family consists of several red chlorophyll catabolite reductase (RCC reductase) proteins. Red chlorophyll catabolite (RCC) reductase (RCCR) and pheophorbide (Pheide) a oxygenase (PaO) catalyse the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of Pheide a to a primary fluorescent catabolite (pFCC) .
Wuthrich KL, Bovet L, Hunziker PE, Donnison IS, Hortensteiner S; , Plant J 2000;21:189-198.: Molecular cloning, functional expression and characterisation of RCC reductase involved in chlorophyll catabolism. PUBMED:10743659 EPMC:10743659
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR009439
This family consists of several red chlorophyll catabolite reductase (RCC reductase) proteins. Red chlorophyll catabolite (RCC) reductase (RCCR) and pheophorbide (Pheide) a oxygenase (PaO) catalyse the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of Pheide a to a primary fluorescent catabolite (pFCC) [PUBMED:10743659].
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Curation and family details
|Seed source:||Pfam-B_15577 (release 9.0)|
|Number in seed:||8|
|Number in full:||86|
|Average length of the domain:||202.40 aa|
|Average identity of full alignment:||42 %|
|Average coverage of the sequence by the domain:||84.35 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||6|
|Download:||download the raw HMM for this family|
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For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe group, to allow us to map Pfam domains onto UniProt sequences and three-dimensional protein structures. The table below shows the structures on which the RCC_reductase domain has been found. There are 10 instances of this domain found in the PDB. Note that there may be multiple copies of the domain in a single PDB structure, since many structures contain multiple copies of the same protein seqence.
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