Summary: Flagellar hook-associated protein 2 C-terminus
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Flagellar hook-associated protein 2 C-terminus Provide feedback
The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria . This alignment covers the C-terminal region of this family of proteins.
Arora SK, Ritchings BW, Almira EC, Lory S, Ramphal R; , Infect Immun 1998;66:1000-1007.: The Pseudomonas aeruginosa flagellar cap protein, FliD, is responsible for mucin adhesion. PUBMED:9488388 EPMC:9488388
Tasteyre A, Karjalainen T, Avesani V, Delmee M, Collignon A, Bourlioux P, Barc MC; , J Clin Microbiol 2001;39:1178-1183.: Molecular characterization of fliD gene encoding flagellar cap and its expression among Clostridium difficile isolates from different serogroups. PUBMED:11230454 EPMC:11230454
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR010809
The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria [PUBMED:9488388]. This alignment covers the C-terminal region of the flagellar hook-associated protein 2.
|Cellular component||bacterial-type flagellum (GO:0009288)|
|Biological process||cell adhesion (GO:0007155)|
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Curation and family details
|Seed source:||Yeats C|
|Number in seed:||35|
|Number in full:||2213|
|Average length of the domain:||236.90 aa|
|Average identity of full alignment:||25 %|
|Average coverage of the sequence by the domain:||45.96 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||7|
|Download:||download the raw HMM for this family|
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