Summary: Uncharacterized conserved protein CG6151-P
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Uncharacterized conserved protein CG6151-P Provide feedback
This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteristic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.
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External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR019365
This is a family of small (less than 200 residue long) proteins that are conserved from fungi to humans. Family members include the TVP18 Golgi membrane proteins that are involved in vesicular trafficking [PUBMED:17178117] and the calcium channel flower proteins, which form calcium channels that regulate synaptic endocytosis [PUBMED:19737521].
|Cellular component||integral to membrane (GO:0016021)|
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We make a range of alignments for each Pfam-A family:
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1Cannot generate PP/Heatmap alignments for seeds; no PP data available
Key: available, not generated, — not available.
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Curation and family details
|Seed source:||KOGs (KOG4085)|
|Author:||KOGs, Finn RD, Coggill PC, Bateman A|
|Number in seed:||25|
|Number in full:||228|
|Average length of the domain:||109.10 aa|
|Average identity of full alignment:||35 %|
|Average coverage of the sequence by the domain:||61.65 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||4|
|Download:||download the raw HMM for this family|
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