HMMER3/b [3.0 | March 2010] NAME LPAM_2 ACC PF13627.1 DESC Prokaryotic lipoprotein-attachment site LENG 24 ALPH amino RF no CS no MAP yes DATE Thu Oct 4 04:11:06 2012 NSEQ 142 EFFN 142.000000 CKSUM 2089381703 GA 27.00 27.00; TC 27.00 27.00; NC 26.80 26.80; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.0652 0.72418 STATS LOCAL VITERBI -7.1810 0.72418 STATS LOCAL FORWARD -4.1363 0.72418 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.03967 2.95707 4.39418 4.74344 3.41486 2.01406 5.86517 3.12976 3.10981 1.58863 4.11543 5.32727 2.58181 3.82645 3.57736 2.98755 3.13472 2.68169 6.40028 3.70445 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.00000 * 1 2.34359 3.04572 7.26910 6.67985 3.45803 3.89997 5.01337 2.55779 1.72088 1.98484 4.84790 4.65995 2.74662 3.79960 2.19340 3.41688 3.04270 2.25620 7.83683 6.64691 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 2 2.27386 4.63505 7.75974 7.14352 3.22502 3.70748 7.28864 2.52348 3.66276 1.15648 3.95636 7.12088 3.74181 3.83266 3.52369 2.32619 2.49745 2.60445 3.77560 3.53603 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 3 2.20049 3.77107 7.76460 7.14817 3.16452 3.58590 7.29058 2.27672 6.92946 1.06629 3.91899 7.12372 4.40523 7.05766 6.93200 3.40538 3.85108 1.36430 7.77973 6.60411 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 4 1.36518 7.15840 7.76569 7.14933 2.85122 3.95842 7.29188 2.15958 6.93067 1.34154 3.77297 7.12489 4.63629 7.05888 6.93325 2.37766 3.85517 1.99282 7.78100 6.60539 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 5 2.43105 3.76545 7.76362 7.14713 3.05645 1.89767 7.28942 2.46336 6.92838 1.30000 3.29860 7.12266 3.59401 7.05655 6.93089 4.17525 2.75672 1.73328 7.77859 4.79014 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.04473 8.54441 3.13389 0.61958 0.77255 0.48576 0.95510 6 2.26998 3.59622 7.72380 7.10748 3.15064 2.95790 7.25018 1.64573 6.88888 0.97302 3.15754 7.08312 7.27890 7.01712 6.89149 3.44900 3.03147 2.61916 7.73922 6.56360 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00030 8.49998 9.22233 0.61958 0.77255 0.66650 0.72053 7 0.93559 3.91349 7.74389 7.12754 2.92112 2.74129 7.27008 3.31893 6.90887 1.64449 3.57010 7.10305 7.29887 7.03708 6.91144 2.44154 3.60987 2.41169 7.75920 6.58359 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00998 8.52198 4.63275 0.61958 0.77255 0.36223 1.19113 8 1.75028 3.83770 7.74896 7.13252 4.42334 3.24415 7.27488 2.96058 6.91378 1.08118 3.78557 7.10803 5.04273 7.04197 6.91632 1.96045 2.15889 2.65999 7.76407 6.58846 8 - - 2.68789 4.39163 2.77691 2.73294 3.45888 2.39849 3.72666 3.29525 2.67912 2.69526 4.24861 2.90518 2.73911 3.18317 2.89972 2.38058 2.77111 2.98689 4.58648 3.61674 0.07843 2.68522 4.92970 0.58325 0.81664 0.48662 0.95373 9 1.29043 4.05213 7.75133 7.13488 3.86027 2.82720 7.27725 2.85085 6.91615 1.82343 3.91559 7.11040 4.51825 7.04434 6.91869 2.24846 2.09564 1.95771 7.76643 6.59082 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53139 9.25374 0.61958 0.77255 0.55356 0.85543 10 1.36133 2.73748 7.75764 7.14116 3.55203 3.68930 7.28361 2.97702 6.92245 0.91173 3.80683 5.00005 7.31281 4.69804 6.92504 3.88042 2.88805 2.96043 7.77284 6.59723 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00390 8.53848 5.60145 0.61958 0.77255 0.94136 0.49446 11 1.00010 4.17083 7.75463 7.13818 2.82550 2.34152 7.28053 3.15164 6.91944 1.91408 3.23106 7.11369 5.21872 7.04762 6.92198 2.68445 2.51569 2.66435 7.76972 6.59412 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.53488 9.25722 0.61958 0.77255 0.69188 0.69441 12 3.66666 4.48491 7.99218 7.38953 2.95180 4.20290 7.55952 3.32827 7.18090 0.30674 6.44864 7.36835 7.54706 7.30970 7.18823 4.60097 6.22955 2.25874 8.03545 6.86217 14 - - 2.68602 4.42369 2.77663 2.73267 3.46072 2.40656 3.72638 3.29086 2.67884 2.68927 4.24833 2.90490 2.73883 3.18290 2.89944 2.37797 2.77488 2.98009 4.58621 3.61647 0.10719 2.28722 9.26083 0.00911 4.70310 0.27968 1.41070 13 0.83377 4.74990 7.74894 7.13563 4.86491 3.00762 7.29514 4.28288 6.92185 3.52175 6.28875 4.51531 7.32063 4.87556 6.93191 1.56989 1.72434 3.13737 7.79145 6.61550 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 14 1.14063 8.20074 8.97375 9.04360 9.22389 0.43317 9.35826 8.76678 8.86046 8.45767 9.15590 8.00125 7.89797 8.84604 8.71779 3.57403 6.89425 7.70491 10.55120 9.61468 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 15 10.02629 0.00070 9.95145 10.04477 10.59516 9.00767 10.55808 11.04169 10.23757 10.05426 11.43631 10.39538 9.64083 10.55474 9.96858 10.46579 10.41009 10.69142 10.84038 10.84794 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 16 9.98976 10.42531 9.94417 10.03752 10.60057 0.00062 10.55616 11.03638 10.23318 10.05275 11.43011 10.38270 9.63628 10.54815 9.96598 10.41951 10.38077 10.67624 10.84190 10.85634 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 17 5.78042 7.19015 7.53838 6.93311 3.79908 6.92444 7.24361 3.04528 3.82065 2.65671 6.30773 4.24497 7.28995 1.05733 1.19681 4.39196 3.85408 2.30313 7.80778 3.48726 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 18 7.61481 9.45896 8.88110 7.32296 9.29607 7.99762 7.53535 8.38179 0.27686 7.59731 3.81388 7.48825 8.24545 4.25202 2.29059 2.80524 3.23444 8.12327 9.45827 8.51982 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 19 3.70076 8.18844 8.97952 9.04876 9.21444 0.07889 9.35131 8.75483 8.85342 8.44722 9.14393 7.99134 7.88711 8.83835 8.70909 3.55613 3.92730 7.69207 10.54815 9.60685 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 20 2.08258 7.81673 2.03916 6.52907 7.30585 3.54095 7.51868 6.68639 6.53151 4.36498 4.60301 6.84624 0.55335 4.68921 6.88787 2.73050 3.98672 4.07585 8.71939 7.48777 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 21 8.16044 9.21385 10.09456 9.56503 6.93064 9.58678 9.91494 4.06755 9.51051 0.05168 6.62379 9.99664 3.56811 8.95425 9.23122 9.26324 8.32834 6.74761 9.39452 8.64848 24 - - 2.69527 4.43134 2.78429 2.71267 3.47263 2.41422 3.73403 3.30263 2.68650 2.70264 4.25599 2.91256 2.69159 3.19055 2.90710 2.36844 2.78429 2.95876 4.59386 3.62412 0.13707 2.05574 9.26676 1.60413 0.22447 0.48576 0.95510 22 5.70984 7.91752 2.50588 2.09514 1.95242 6.51547 3.94619 4.33207 4.01188 6.17344 6.98979 6.04139 6.91663 3.13836 6.00697 5.73828 3.68965 4.08984 8.37933 0.69250 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.54441 9.26676 0.61958 0.77255 0.48576 0.95510 23 3.37348 7.15955 5.09149 7.12030 2.04432 6.95096 5.15454 3.17719 3.84659 1.11745 2.60360 7.10953 2.26446 4.30319 2.57966 6.26174 3.46613 2.05048 7.78113 6.60491 31 - - 2.68331 4.42733 2.77692 2.72367 3.46862 2.40794 3.73003 3.29311 2.68249 2.69863 4.22337 2.90548 2.71642 3.18251 2.90309 2.38395 2.76999 2.99027 4.58985 3.62012 0.13672 2.05814 9.26676 1.02623 0.44372 0.48576 0.95510 24 4.19975 8.22828 4.64276 8.43162 9.22346 6.99996 9.22843 8.76654 8.70532 8.45047 9.15884 7.87430 0.05661 8.66698 8.67978 4.14175 6.90635 4.56033 10.55317 9.56419 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00019 8.54432 * 0.61958 0.77255 0.00000 * //