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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
A-2_8-polyST PF07388 Family 3 54 403.30 53 97.46 Changed Alpha-2,8-polysialyltransferase (POLYST)
A1_Propeptide PF07966 Motif 85 802 28.40 36 7.79 Changed A1 Propeptide
A2L_zn_ribbon PF08792 Domain 14 90 32.30 41 12.11 Changed A2L zinc ribbon domain
A2M PF00207 Family 131 2819 88.80 26 5.98 Changed Alpha-2-macroglobulin family
A2M_comp PF07678 Domain 43 1721 213.90 31 19.09 Changed A-macroglobulin complement component
A2M_N PF01835 Domain 175 2926 95.90 22 6.25 Changed MG2 domain
A2M_N_2 PF07703 Family 184 2785 141.90 22 9.28 Changed Alpha-2-macroglobulin family N-terminal region
A2M_recep PF07677 Domain 92 1246 88.00 30 6.72 Changed A-macroglobulin receptor
AAA PF00004 Family 207 52090 130.80 25 20.90 Changed ATPase family associated with various cellular activities (AAA)
AAA-ATPase_like PF09820 Family 84 1607 241.50 31 54.30 Changed Predicted AAA-ATPase
AAA_10 PF12846 Domain 149 6551 297.10 16 39.53 Changed AAA-like domain
AAA_11 PF13086 Domain 118 5668 222.70 20 21.82 Changed AAA domain
AAA_12 PF13087 Domain 125 5685 189.40 23 15.53 Changed AAA domain
AAA_13 PF13166 Domain 43 601 537.10 15 85.43 Changed AAA domain
AAA_14 PF13173 Family 476 3483 125.60 23 29.71 Changed AAA domain
AAA_15 PF13175 Domain 19 1024 226.90 14 45.90 Changed AAA ATPase domain
AAA_16 PF13191 Domain 217 4712 171.70 16 17.45 Changed AAA ATPase domain
AAA_17 PF13207 Domain 412 3187 153.40 15 55.53 Changed AAA domain
AAA_18 PF13238 Domain 124 2477 139.40 17 66.84 Changed AAA domain
AAA_19 PF13245 Domain 209 2781 80.60 23 8.66 Changed Part of AAA domain
AAA_2 PF07724 Domain 139 20963 171.50 36 26.68 Changed AAA domain (Cdc48 subfamily)
AAA_21 PF13304 Domain 220 6048 227.70 14 53.08 Changed AAA domain
AAA_22 PF13401 Domain 168 4268 134.70 17 27.70 Changed AAA domain
AAA_23 PF13476 Family 469 5945 299.00 13 41.98 Changed AAA domain
AAA_24 PF13479 Domain 49 566 223.00 18 78.95 Changed AAA domain
AAA_25 PF13481 Domain 101 6612 168.50 30 36.74 Changed AAA domain
AAA_26 PF13500 Domain 55 5230 206.80 25 57.02 Changed AAA domain
AAA_27 PF13514 Domain 10 1921 415.80 15 69.93 Changed AAA domain
AAA_28 PF13521 Domain 115 1816 163.30 27 52.65 Changed AAA domain
AAA_29 PF13555 Domain 68 804 55.80 31 5.90 Changed P-loop containing region of AAA domain
AAA_3 PF07726 Family 55 4128 130.60 58 39.23 Changed ATPase family associated with various cellular activities (AAA)
AAA_30 PF13604 Domain 84 5200 192.00 29 21.89 Changed AAA domain
AAA_31 PF13614 Domain 61 7392 138.30 24 29.84 Changed AAA domain
AAA_32 PF13654 Domain 125 1541 341.70 25 52.08 Changed AAA domain
AAA_33 PF13671 Domain 146 4032 138.60 17 34.96 Changed AAA domain
AAA_34 PF13872 Domain 39 492 270.10 45 24.25 Changed P-loop containing NTP hydrolase pore-1
AAA_35 PF14516 Family 99 465 318.70 25 46.18 New AAA-like domain
AAA_4 PF04326 Domain 163 2671 120.30 21 27.02 Changed Divergent AAA domain
AAA_5 PF07728 Domain 34 10563 134.50 18 14.25 Changed AAA domain (dynein-related subfamily)
AAA_6 PF12774 Family 3 2434 209.40 54 6.46 Changed Hydrolytic ATP binding site of dynein motor region D1
AAA_7 PF12775 Family 3 2098 255.70 31 7.07 Changed P-loop containing dynein motor region D3
AAA_8 PF12780 Domain 3 2160 247.80 35 7.05 Changed P-loop containing dynein motor region D4
AAA_9 PF12781 Domain 3 2170 214.80 38 6.23 Changed ATP-binding dynein motor region D5
AAA_assoc PF14363 Family 102 409 98.40 24 20.91 Changed Domain associated at C-terminal with AAA
AAA_assoc_C PF09821 Domain 49 413 118.50 38 29.96 Changed C-terminal AAA-associated domain
AAA_PrkA PF08298 Domain 7 1391 347.80 58 55.27 Changed PrkA AAA domain
AalphaY_MDB PF04611 Family 5 6 146.80 51 15.97 Changed Mating type protein A alpha Y mating type dependent binding region
AAL_decarboxy PF03306 Family 71 1480 214.90 42 90.92 Changed Alpha-acetolactate decarboxylase
AAR2 PF05282 Family 41 321 325.70 23 83.00 Changed AAR2 protein
AARP2CN PF08142 Domain 73 707 82.40 35 9.33 Changed AARP2CN (NUC121) domain
AAT PF03417 Family 18 964 218.40 21 58.87 Changed Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
AATase PF07247 Family 9 349 388.30 14 80.46 Changed Alcohol acetyltransferase
AATF-Che1 PF13339 Family 65 310 134.70 26 27.10 Changed Apoptosis antagonizing transcription factor
AA_kinase PF00696 Family 135 25691 240.60 20 64.39 Changed Amino acid kinase family
AA_permease PF00324 Family 26 17705 417.10 27 85.04 Changed Amino acid permease
AA_permease_2 PF13520 Family 61 23261 418.20 16 86.76 Changed Amino acid permease
AA_permease_C PF13906 Domain 56 923 50.00 44 8.37 Changed C-terminus of AA_permease
AA_permease_N PF08403 Family 16 266 70.70 44 7.06 Changed Amino acid permease N-terminal
AA_synth PF06684 Family 55 331 173.60 46 89.66 Changed Amino acid synthesis
Aa_trans PF01490 Family 24 6390 337.70 15 78.72 Changed Transmembrane amino acid transporter protein
ABA_GPCR PF12430 Family 44 301 172.90 36 36.74 Changed Abscisic acid G-protein coupled receptor
ABA_WDS PF02496 Family 17 393 70.70 70 52.27 Changed ABA/WDS induced protein
AbbA_antirepres PF14156 Family 6 115 61.00 70 96.46 Changed Antirepressor AbbA
ABC-3 PF00950 Family 16 7614 251.50 28 90.95 Changed ABC 3 transport family
ABC1 PF03109 Family 32 5521 116.90 31 21.56 Changed ABC1 family
ABC2_membrane PF01061 Family 298 15925 204.80 15 46.78 Changed ABC-2 type transporter
ABC2_membrane_2 PF12679 Domain 35 2420 277.90 14 89.44 Changed ABC-2 family transporter protein
ABC2_membrane_3 PF12698 Family 220 16168 336.20 12 63.90 Changed ABC-2 family transporter protein
ABC2_membrane_4 PF12730 Family 293 7890 250.10 12 82.58 Changed ABC-2 family transporter protein
ABC2_membrane_5 PF13346 Family 126 1444 201.80 18 90.65 Changed ABC-2 family transporter protein
ABC2_membrane_6 PF06182 Family 12 2005 223.40 23 87.05 Changed ABC-2 family transporter protein
ABC_ATPase PF09818 Family 44 462 421.10 45 75.58 Changed Predicted ATPase of the ABC class
ABC_cobalt PF09819 Family 51 1105 127.90 35 65.84 Changed ABC-type cobalt transport system, permease component
ABC_membrane PF00664 Family 70 51056 265.40 13 43.23 Changed ABC transporter transmembrane region
ABC_membrane_2 PF06472 Family 26 2221 271.60 24 45.53 Changed ABC transporter transmembrane region 2
ABC_membrane_3 PF13748 Family 20 130 207.20 47 78.77 Changed ABC transporter transmembrane region
ABC_sub_bind PF04392 Family 9 2266 277.50 32 82.31 Changed ABC transporter substrate binding protein
ABC_tran PF00005 Domain 55 363409 147.80 27 41.67 Changed ABC transporter
ABC_transp_aux PF09822 Family 88 807 225.20 19 41.63 Changed ABC-type uncharacterized transport system
ABC_trans_N PF14510 Domain 317 1186 101.70 20 7.47 New ABC-transporter extracellular N-terminal
ABC_tran_2 PF12848 Domain 246 15857 86.00 24 14.83 Changed ABC transporter
Abdominal-A PF12407 Family 5 126 23.90 83 12.42 Changed Homeobox protein
AbfB PF05270 Family 11 334 131.80 27 13.91 Changed Alpha-L-arabinofuranosidase B (ABFB)
ABG_transport PF03806 Family 9 1493 425.00 40 96.44 Changed AbgT putative transporter family
Abhydrolase_1 PF00561 Domain 48 9019 242.40 13 59.97 Changed alpha/beta hydrolase fold
Abhydrolase_2 PF02230 Domain 12 2930 197.40 21 84.53 Changed Phospholipase/Carboxylesterase
Abhydrolase_3 PF07859 Domain 130 13075 191.50 20 57.99 Changed alpha/beta hydrolase fold
Abhydrolase_4 PF08386 Family 38 1197 102.40 26 19.93 Changed TAP-like protein
Abhydrolase_5 PF12695 Domain 308 16512 192.90 14 59.02 Changed Alpha/beta hydrolase family
Abhydrolase_6 PF12697 Domain 785 53202 238.80 14 74.29 Changed Alpha/beta hydrolase family
Abhydrolase_7 PF12715 Family 4 102 320.60 36 84.06 Changed Abhydrolase family
Abhydrolase_8 PF06259 Family 6 556 174.30 31 36.72 Changed Alpha/beta hydrolase
Abhydrolase_9 PF10081 Family 25 395 266.90 43 52.72 Changed Alpha/beta-hydrolase family
Abhydrolase_9_N PF15420 Family 27 350 196.00 35 35.63 New Alpha/beta-hydrolase family N-terminus
Abhydro_lipase PF04083 Family 82 1362 63.00 36 14.19 Changed Partial alpha/beta-hydrolase lipase region
Abi PF02517 Family 1333 12845 110.90 21 43.17 Changed CAAX protease self-immunity
AbiH PF14253 Family 44 409 245.00 19 82.16 Changed Bacteriophage abortive infection AbiH
Abi_2 PF07751 Family 111 1544 178.60 18 63.71 Changed Abi-like protein
Abi_C PF14355 Family 92 373 78.90 23 29.98 Changed Abortive infection C-terminus
Abi_HHR PF07815 Family 11 332 76.80 62 17.42 Changed Abl-interactor HHR
ABM PF03992 Domain 114 8140 77.50 17 63.08 Changed Antibiotic biosynthesis monooxygenase
Abp2 PF09441 Family 6 71 167.70 58 23.27 Changed ARS binding protein 2
AbrB-like PF14250 Family 31 183 70.60 55 54.51 Changed AbrB-like transcriptional regulator
Acatn PF13000 Family 2 464 242.70 26 72.83 Changed Acetyl-coenzyme A transporter 1
ACBP PF00887 Domain 101 1677 85.20 32 33.64 Changed Acyl CoA binding protein
ACCA PF03255 Family 15 3540 133.30 51 41.80 Changed Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
ACC_central PF08326 Family 37 703 529.70 28 30.19 Changed Acetyl-CoA carboxylase, central region
ACC_epsilon PF13822 Family 83 404 60.60 33 71.49 Changed Acyl-CoA carboxylase epsilon subunit
ACDC PF14733 Family 28 106 94.70 22 6.97 New AP2-coincident C-terminal
AceK PF06315 Family 39 830 541.90 62 96.03 Changed Isocitrate dehydrogenase kinase/phosphatase (AceK)
Acetate_kinase PF00871 Family 11 6003 366.90 38 95.86 Changed Acetokinase family
AcetDehyd-dimer PF09290 Domain 62 778 146.10 64 47.83 Changed Prokaryotic acetaldehyde dehydrogenase, dimerisation
Acetone_carb_G PF08882 Domain 24 126 111.40 52 68.55 Changed Acetone carboxylase gamma subunit
AcetylCoA_hydro PF02550 Domain 5 2652 179.70 26 42.46 Changed Acetyl-CoA hydrolase/transferase N-terminal domain
AcetylCoA_hyd_C PF13336 Domain 251 2410 149.60 42 31.00 Changed Acetyl-CoA hydrolase/transferase C-terminal domain
Acetyltransf_1 PF00583 Family 241 50804 83.90 18 39.27 Changed Acetyltransferase (GNAT) family
Acetyltransf_10 PF13673 Domain 46 6639 116.40 17 61.61 Changed Acetyltransferase (GNAT) domain
Acetyltransf_11 PF13720 Domain 349 2605 83.10 37 31.62 Changed Udp N-acetylglucosamine O-acyltransferase; Domain 2
Acetyltransf_13 PF13880 Domain 40 326 69.20 42 14.58 Changed ESCO1/2 acetyl-transferase
Acetyltransf_2 PF00797 Family 33 2001 229.20 28 85.40 Changed N-acetyltransferase
Acetyltransf_3 PF13302 Domain 406 20736 139.30 19 68.41 Changed Acetyltransferase (GNAT) domain
Acetyltransf_4 PF13420 Domain 21 5238 151.00 22 79.81 Changed Acetyltransferase (GNAT) domain
Acetyltransf_5 PF13444 Domain 244 1571 102.60 30 27.02 Changed Acetyltransferase (GNAT) domain
Acetyltransf_6 PF13480 Domain 211 1584 142.00 14 36.55 Changed Acetyltransferase (GNAT) domain
Acetyltransf_7 PF13508 Domain 163 13825 86.50 18 43.91 Changed Acetyltransferase (GNAT) domain
Acetyltransf_8 PF13523 Domain 54 3083 153.50 19 66.16 Changed Acetyltransferase (GNAT) domain
Acetyltransf_9 PF13527 Domain 105 3978 126.00 21 48.77 Changed Acetyltransferase (GNAT) domain
Acetyltransf_CG PF14542 Domain 355 2309 78.60 29 78.76 New GCN5-related N-acetyl-transferase
AChE_tetra PF08674 Domain 6 95 37.40 68 6.56 Changed Acetylcholinesterase tetramerisation domain
ACI44 PF15270 Family 3 3 64.70 93 86.22 New Metallo-carboxypeptidase inhibitor
Acid_phosphat_B PF03767 Family 31 1773 209.70 26 84.65 Changed HAD superfamily, subfamily IIIB (Acid phosphatase)
Acid_PPase PF12689 Family 43 326 152.80 32 75.86 Changed Acid Phosphatase
Aconitase PF00330 Family 11 14106 338.30 28 64.53 Changed Aconitase family (aconitate hydratase)
Aconitase_2_N PF06434 Family 94 1563 208.10 67 25.23 Changed Aconitate hydratase 2 N-terminus
Aconitase_B_N PF11791 Domain 94 1508 149.10 63 17.65 Changed Aconitate B N-terminal domain
Aconitase_C PF00694 Domain 18 9126 118.60 33 21.91 Changed Aconitase C-terminal domain
ACOX PF01756 Family 37 1066 165.80 23 25.84 Changed Acyl-CoA oxidase
ACP PF06857 Family 40 1378 86.00 40 84.14 Changed Malonate decarboxylase delta subunit (MdcD)
Acp26Ab PF05777 Family 4 17 88.50 77 86.89 Changed Drosophila accessory gland-specific peptide 26Ab (Acp26Ab)
ACP53EA PF06313 Family 6 87 90.20 30 76.51 Changed Drosophila ACP53EA protein
ACPS PF01648 Family 154 7983 110.90 21 48.33 Changed 4'-phosphopantetheinyl transferase superfamily
ACP_syn_III PF08545 Domain 170 6937 78.70 35 23.31 Changed 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
ACP_syn_III_C PF08541 Domain 187 7398 89.30 33 25.98 Changed 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ACR_tran PF00873 Family 16 19835 888.80 26 97.07 Changed AcrB/AcrD/AcrF family
ACT PF01842 Domain 180 20885 64.10 16 16.98 Changed ACT domain
Act-Frag_cataly PF09192 Domain 7 59 252.30 26 38.15 Changed Actin-fragmin kinase, catalytic
ActA PF05058 Family 2 1025 335.50 65 99.41 Changed ActA Protein
ACTH_domain PF00976 Family 13 1273 38.60 83 21.34 Changed Corticotropin ACTH domain
Actin PF00022 Family 28 15168 241.30 43 92.30 Changed Actin
Actino_peptide PF14408 Family 16 32 61.30 36 65.68 Changed Ribosomally synthesized peptide in actinomycetes
Activator-TraM PF11657 Family 11 77 141.40 40 96.89 Changed Transcriptional activator TraM
Activator_LAG-3 PF11498 Family 2 17 259.40 31 60.52 Changed Transcriptional activator LAG-3
Activin_recp PF01064 Domain 26 942 83.70 25 16.38 Changed Activin types I and II receptor domain
ACT_3 PF10000 Domain 48 273 71.00 38 48.18 Changed ACT domain
ACT_4 PF13291 Domain 182 5583 78.80 25 11.21 Changed ACT domain
ACT_5 PF13710 Domain 79 4946 62.70 40 43.40 Changed ACT domain
ACT_6 PF13740 Domain 82 3060 75.40 27 39.29 Changed ACT domain
ACT_7 PF13840 Domain 192 6068 65.50 33 16.45 Changed ACT domain
Acyl-ACP_TE PF01643 Family 27 1578 228.20 24 89.64 Changed Acyl-ACP thioesterase
Acyl-CoA_dh_1 PF00441 Domain 58 26994 150.80 24 33.41 Changed Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_2 PF08028 Domain 37 2598 132.50 23 33.66 Changed Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_C PF12806 Domain 470 2011 128.00 25 21.59 Changed Acetyl-CoA dehydrogenase C-terminal like
Acyl-CoA_dh_M PF02770 Domain 69 26220 53.90 34 11.57 Changed Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_N PF02771 Domain 988 26175 112.70 20 25.73 Changed Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_ox_N PF14749 Domain 150 617 114.30 24 17.60 New Acyl-coenzyme A oxidase N-terminal
Acyl-thio_N PF12590 Family 24 113 119.70 58 29.72 Changed Acyl-ATP thioesterase
AcylCoA_dehyd_C PF12186 Domain 7 120 112.90 46 19.94 Changed Acyl-CoA dehydrogenase C terminal
AcylCoA_DH_N PF12418 Family 232 1684 32.30 33 5.44 Changed Acyl-CoA dehydrogenase N terminal
Acylphosphatase PF00708 Domain 75 4748 90.30 31 29.81 Changed Acylphosphatase
Acyltransferase PF01553 Family 57 17338 134.80 20 34.96 Changed Acyltransferase
Acyl_CoA_thio PF02551 Domain 9 1320 124.10 41 59.06 Changed Acyl-CoA thioesterase
Acyl_transf_1 PF00698 Domain 12 13987 292.50 26 23.26 Changed Acyl transferase domain
Acyl_transf_2 PF02273 Domain 4 59 269.20 60 83.59 Changed Acyl transferase
Acyl_transf_3 PF01757 Family 111 12610 328.50 15 74.75 Changed Acyltransferase family
AD PF09793 Domain 29 270 89.20 31 42.44 Changed Anticodon-binding domain
Ada3 PF10198 Family 23 232 133.70 32 22.73 Changed Histone acetyltransferases subunit 3
ADAM_CR PF08516 Family 68 1660 112.40 31 15.88 Changed ADAM cysteine-rich
ADAM_spacer1 PF05986 Family 23 1464 112.10 30 10.54 Changed ADAM-TS Spacer 1
Adaptin_binding PF10199 Family 38 207 139.40 22 39.17 Changed Alpha and gamma adaptin binding protein p34
Adaptin_N PF01602 Family 32 3862 460.30 19 58.89 Changed Adaptin N terminal region
Adap_comp_sub PF00928 Family 46 2208 258.90 25 54.82 Changed Adaptor complexes medium subunit family
Ada_Zn_binding PF02805 Family 150 1999 64.90 47 18.48 Changed Metal binding domain of Ada
ADC PF06314 Family 72 670 225.10 20 74.15 Changed Acetoacetate decarboxylase (ADC)
Adenine_deam_C PF13382 Family 110 1480 167.40 36 29.18 Changed Adenine deaminase C-terminal domain
Adenine_glyco PF03352 Family 190 3641 166.00 41 85.63 Changed Methyladenine glycosylase
Adenosine_kin PF04008 Family 34 283 154.30 59 95.54 Changed Adenosine specific kinase
Adeno_100 PF02438 Family 19 136 588.50 65 76.54 Changed Late 100kD protein
Adeno_52K PF03052 Family 18 154 187.10 52 54.87 Changed Adenoviral protein L1 52/55-kDa
Adeno_E1A PF02703 Family 15 313 158.20 37 97.87 Changed Early E1A protein
Adeno_E1B_19K PF01691 Family 17 117 134.60 47 75.49 Changed Adenovirus E1B 19K protein / small t-antigen
Adeno_E1B_55K PF01696 Family 15 139 334.00 51 78.03 Changed Adenovirus EB1 55K protein / large t-antigen
Adeno_E1B_55K_N PF04623 Family 5 123 68.70 40 17.64 Changed Adenovirus E1B protein N-terminus
Adeno_E3 PF06040 Family 4 61 125.00 48 70.68 Changed Adenovirus E3 protein
Adeno_E3A PF05248 Family 11 109 105.20 56 97.52 Changed Adenovirus E3A
Adeno_E3B PF03376 Family 8 87 66.40 59 73.42 Changed Adenovirus E3B protein
Adeno_E3_14_5 PF04834 Family 8 110 104.20 50 79.38 Changed Early E3 14.5 kDa protein
Adeno_E3_15_3 PF03307 Family 8 100 116.40 64 88.98 Changed Adenovirus 15.3kD protein in E3 region
Adeno_E3_CR1 PF02440 Family 20 217 58.70 42 36.33 Changed Adenovirus E3 region protein CR1
Adeno_E3_CR2 PF02439 Family 9 114 37.90 49 13.63 Changed Adenovirus E3 region protein CR2
Adeno_E4 PF05385 Family 8 88 107.20 50 90.15 Changed Mastadenovirus early E4 13 kDa protein
Adeno_E4_34 PF04528 Family 17 117 147.40 57 51.52 Changed Adenovirus early E4 34 kDa protein conserved region
Adeno_E4_ORF3 PF06931 Family 7 84 111.80 67 97.19 Changed Mastadenovirus E4 ORF3 protein
Adeno_GP19K PF04881 Family 6 78 133.40 56 81.67 Changed Adenovirus GP19K
Adeno_hexon PF01065 Domain 36 2918 236.80 39 78.17 Changed Hexon, adenovirus major coat protein, N-terminal domain
Adeno_hexon_C PF03678 Domain 23 736 193.00 81 34.68 Changed Hexon, adenovirus major coat protein, C-terminal domain
Adeno_IVa2 PF02456 Family 11 128 359.20 69 84.98 Changed Adenovirus IVa2 protein
Adeno_knob PF00541 Domain 46 374 176.00 40 50.73 Changed Adenoviral fibre protein (knob domain)
Adeno_Penton_B PF01686 Family 19 217 436.00 67 95.37 Changed Adenovirus penton base protein
Adeno_PIX PF03955 Family 12 121 109.30 59 79.56 Changed Adenovirus hexon-associated protein (IX)
Adeno_PV PF03910 Family 12 112 325.30 60 96.48 Changed Adenovirus minor core protein PV
Adeno_PVIII PF01310 Family 17 163 206.60 56 98.48 Changed Adenovirus hexon associated protein, protein VIII
Adeno_PX PF05829 Family 18 117 44.30 69 55.74 Changed Adenovirus late L2 mu core protein (Protein X)
Adeno_shaft PF00608 Repeat 63 1159 30.00 30 24.56 Changed Adenoviral fibre protein (repeat/shaft region)
Adeno_terminal PF02459 Family 17 138 552.20 65 87.77 Changed Adenoviral DNA terminal protein
Adeno_VII PF03228 Family 14 129 116.10 57 66.84 Changed Adenoviral core protein VII
Adenylate_cycl PF01295 Family 18 1028 520.90 64 68.95 Changed Adenylate cyclase, class-I
Adenylsucc_synt PF00709 Domain 92 5395 387.40 46 96.96 Changed Adenylosuccinate synthetase
Adenyl_cycl_N PF12633 Domain 18 1003 184.90 65 24.20 Changed Adenylate cyclase NT domain
Adenyl_transf PF04439 Family 6 625 256.10 36 96.18 Changed Streptomycin adenylyltransferase
Adhes-Ig_like PF09085 Domain 5 43 108.90 71 32.38 Changed Adhesion molecule, immunoglobulin-like
Adhesin_Dr PF04619 Family 6 61 136.70 49 86.71 Changed Dr-family adhesin
Adhesin_P1 PF03257 Family 7 75 87.40 58 10.15 Changed Mycoplasma adhesin P1
ADH_N PF08240 Domain 92 42970 101.00 25 23.28 Changed Alcohol dehydrogenase GroES-like domain
ADH_N_assoc PF13823 Domain 120 1545 22.70 51 5.97 Changed Alcohol dehydrogenase GroES-associated
adh_short PF00106 Domain 230 80936 163.30 25 56.70 Changed short chain dehydrogenase
adh_short_C2 PF13561 Domain 47 22490 228.60 25 81.38 Changed Enoyl-(Acyl carrier protein) reductase
ADH_zinc_N PF00107 Family 108 42002 125.70 20 28.57 Changed Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 Domain 420 4473 130.70 21 25.39 Changed Zinc-binding dehydrogenase
ADIP PF11559 Family 24 277 144.40 26 27.58 Changed Afadin- and alpha -actinin-Binding
Adipogenin PF15202 Family 2 20 73.80 79 66.89 New Adipogenin
Adipokin_hormo PF06377 Family 15 60 52.90 42 44.60 Changed Adipokinetic hormone
ADK PF00406 Domain 23 9734 160.60 42 74.26 Changed Adenylate kinase
ADK_lid PF05191 Domain 141 6209 36.00 57 18.92 Changed Adenylate kinase, active site lid
AdoHcyase PF05221 Domain 9 2525 421.00 48 95.54 Changed S-adenosyl-L-homocysteine hydrolase
AdoHcyase_NAD PF00670 Domain 16 2557 158.70 52 35.69 Changed S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AdoMetDC_leader PF08132 Family 3 44 50.70 78 40.31 Changed S-adenosyl-l-methionine decarboxylase leader peptide
AdoMet_dc PF02675 Family 134 1798 119.90 39 60.28 Changed S-adenosylmethionine decarboxylase
AdoMet_MTase PF07757 Family 3 246 106.20 44 20.68 Changed Predicted AdoMet-dependent methyltransferase
AdoMet_Synthase PF01941 Family 48 243 380.20 42 98.33 Changed S-adenosylmethionine synthetase (AdoMet synthetase)
ADPrib_exo_Tox PF03496 Family 26 558 184.60 17 40.09 Changed ADP-ribosyltransferase exoenzyme
ADP_PFK_GK PF04587 Family 9 234 386.20 27 87.69 Changed ADP-specific Phosphofructokinase/Glucokinase conserved region
ADP_ribosyl_GH PF03747 Family 176 3139 273.20 22 79.26 Changed ADP-ribosylglycohydrolase
ADSL_C PF10397 Domain 148 3649 82.20 29 18.48 Changed Adenylosuccinate lyase C-terminus
Ad_cyc_g-alpha PF08509 Domain 19 100 51.20 30 2.63 Changed Adenylate cyclase G-alpha binding domain
Aegerolysin PF06355 Family 18 123 120.00 26 84.40 Changed Aegerolysin
Aerolysin PF01117 Domain 14 252 219.70 45 72.35 Changed Aerolysin toxin
AF-4 PF05110 Family 6 483 610.70 28 90.08 Changed AF-4 proto-oncoprotein
AF0941-like PF14591 Domain 6 11 107.20 28 84.46 New AF0941-like
AF1Q PF15017 Family 10 164 74.70 26 19.11 New Drug resistance and apoptosis regulator
AF2331-like PF14556 Domain 3 3 93.30 46 100.00 New AF2331-like
AfaD PF05775 Family 10 168 107.60 55 72.60 Changed Enterobacteria AfaD invasin protein
Afaf PF15339 Family 11 38 182.00 62 66.58 New Acrosome formation-associated factor
AFG1_ATPase PF03969 Family 8 2702 309.70 33 88.96 Changed AFG1-like ATPase
Afi1 PF07792 Domain 31 156 149.80 36 19.68 Changed Docking domain of Afi1 for Arf3 in vesicle trafficking
AflR PF08493 Family 5 174 201.60 32 56.62 Changed Aflatoxin regulatory protein
AFOR_C PF01314 Domain 112 1171 383.30 27 62.78 Changed Aldehyde ferredoxin oxidoreductase, domains 2 & 3
AFOR_N PF02730 Domain 111 1162 199.10 39 32.36 Changed Aldehyde ferredoxin oxidoreductase, N-terminal domain
AFP PF02420 Repeat 9 502 11.70 45 80.61 Changed Insect antifreeze protein repeat
AfsA PF03756 Domain 34 276 127.30 20 65.85 Changed A-factor biosynthesis hotdog domain
AFT PF08731 Family 8 82 88.90 35 18.93 Changed Transcription factor AFT
Aft1_HRA PF11786 Domain 5 90 79.20 61 14.87 Changed Aft1 HRA domain
Aft1_HRR PF11787 Domain 9 76 75.40 49 14.56 Changed Aft1 HRR domain
Aft1_OSA PF11785 Domain 10 122 51.10 40 9.37 Changed Aft1 osmotic stress response (OSM) domain
AftA_C PF12249 Family 9 161 178.10 55 27.40 Changed Arabinofuranosyltransferase A C terminal
AftA_N PF12250 Family 5 168 421.50 50 67.31 Changed Arabinofuranosyltransferase N terminal
Ag332 PF04671 Repeat 41 66 21.20 52 11.32 Changed Erythrocyte membrane-associated giant protein antigen 332
Agenet PF05641 Domain 34 609 67.00 32 12.42 Changed Agenet domain
Agglutinin PF07468 Family 2 39 139.20 29 55.88 Changed Agglutinin
Agouti PF05039 Family 9 278 92.60 45 71.89 Changed Agouti protein
Ago_hook PF10427 Motif 36 202 133.70 41 8.72 Changed Argonaute hook
AgrB PF04647 Family 56 789 179.40 24 93.29 Changed Accessory gene regulator B
AgrD PF05931 Family 21 248 45.10 49 97.59 Changed Staphylococcal AgrD protein
Agro_virD5 PF04730 Family 5 19 432.90 50 93.94 Changed Agrobacterium VirD5 protein
AGT PF11440 Family 2 14 335.00 57 79.25 Changed DNA alpha-glucosyltransferase
AGTRAP PF06396 Family 6 84 144.00 36 83.59 Changed Angiotensin II, type I receptor-associated protein (AGTRAP)
Aha1_N PF09229 Domain 69 522 134.10 25 44.42 Changed Activator of Hsp90 ATPase, N-terminal
AHH PF14412 Family 49 340 106.40 19 19.54 Changed A nuclease family of the HNH/ENDO VII superfamily with conserved AHH
AhpC-TSA PF00578 Domain 124 16547 127.90 25 62.99 Changed AhpC/TSA family
AhpC-TSA_2 PF13911 Domain 82 573 123.50 20 46.43 Changed AhpC/TSA antioxidant enzyme
AHS1 PF02682 Family 158 3092 203.30 32 52.43 Changed Allophanate hydrolase subunit 1
AHS2 PF02626 Family 160 3169 265.10 35 59.05 Changed Allophanate hydrolase subunit 2
AHSA1 PF08327 Family 114 4271 127.90 18 71.07 Changed Activator of Hsp90 ATPase homolog 1-like protein
AHSP PF09236 Domain 3 32 85.80 62 82.00 Changed Alpha-haemoglobin stabilising protein
AIB PF15334 Family 12 28 319.50 66 92.02 New Aurora kinase A and ninein interacting protein
AICARFT_IMPCHas PF01808 Family 9 4880 297.20 42 60.59 Changed AICARFT/IMPCHase bienzyme
Aida_C2 PF14186 Domain 11 105 136.50 53 24.73 Changed Cytoskeletal adhesion
Aida_N PF08910 Family 8 75 93.80 62 33.31 Changed Aida N-terminus
AIF-MLS PF14962 Family 7 112 138.80 31 31.37 New Mitochondria Localisation Sequence
AIF_C PF14721 Domain 23 200 98.30 44 20.11 New Apoptosis-inducing factor, mitochondrion-associated, C-term
AIG1 PF04548 Family 32 1778 173.00 24 40.10 Changed AIG1 family
AIG2 PF06094 Family 90 2098 101.30 28 64.81 Changed AIG2-like family
AIG2_2 PF13772 Family 26 714 83.90 29 41.81 Changed AIG2-like family
Ail_Lom PF06316 Family 2 1349 177.20 65 97.07 Changed Enterobacterial Ail/Lom protein
AIM24 PF01987 Family 153 1844 204.60 25 77.57 Changed Mitochondrial biogenesis AIM24
AIP3 PF03915 Family 18 245 303.00 27 37.23 Changed Actin interacting protein 3
AIPR PF10592 Family 65 420 298.40 19 53.89 Changed AIPR protein
AIRC PF00731 Domain 224 5292 147.40 46 73.54 Changed AIR carboxylase
AIRS PF00586 Domain 856 17593 103.20 23 21.07 Changed AIR synthase related protein, N-terminal domain
AIRS_C PF02769 Domain 169 19206 157.80 18 34.84 Changed AIR synthase related protein, C-terminal domain
AJAP1_PANP_C PF15298 Family 9 85 163.40 48 56.79 New AJAP1/PANP C-terminus
AKAP28 PF14469 Family 15 76 111.90 30 49.52 Changed 28 kDa A-kinase anchor
AKAP2_C PF15304 Family 18 145 242.10 23 39.72 New A-kinase anchor protein 2 C-terminus
AKAP7_NLS PF10469 Domain 50 426 205.50 22 57.73 Changed AKAP7 2'5' RNA ligase-like domain
AKAP7_RIRII_bdg PF10470 Domain 3 57 59.70 63 33.75 Changed PKA-RI-RII subunit binding domain of A-kinase anchor protein
AKAP95 PF04988 Family 9 156 157.10 53 28.51 Changed A-kinase anchoring protein 95 (AKAP95)
AKAP_110 PF05716 Family 5 156 335.10 35 35.52 Changed A-kinase anchor protein 110 kDa (AKAP 110)
AKNA PF12443 Family 4 80 103.60 40 11.37 Changed AT-hook-containing transcription factor
ALAD PF00490 Domain 165 3912 314.40 48 95.89 Changed Delta-aminolevulinic acid dehydratase
AlaDh_PNT_C PF01262 Domain 96 5257 153.50 35 34.75 Changed Alanine dehydrogenase/PNT, C-terminal domain
AlaDh_PNT_N PF05222 Domain 363 5191 132.80 37 29.97 Changed Alanine dehydrogenase/PNT, N-terminal domain
Ala_racemase_C PF00842 Domain 121 5638 125.90 36 32.58 Changed Alanine racemase, C-terminal domain
Ala_racemase_N PF01168 Domain 613 12691 218.10 20 66.44 Changed Alanine racemase, N-terminal domain
Alb1 PF09135 Family 48 156 110.10 28 63.64 Changed Alb1
Alba PF01918 Family 126 745 66.30 25 38.49 Changed Alba
Albumin_I PF08027 Domain 4 79 96.10 46 81.40 Changed Albumin I
AlcCBM31 PF11606 Family 3 5 92.00 48 19.81 Changed Family 31 carbohydrate binding protein
Aldedh PF00171 Family 119 43773 407.20 25 80.35 Changed Aldehyde dehydrogenase family
Aldolase PF01081 Family 5 4204 192.20 33 90.12 Changed KDPG and KHG aldolase
Aldolase_2 PF10120 Family 52 250 164.60 30 46.24 Changed Putative aldolase
Aldolase_II PF00596 Domain 502 9699 184.40 24 69.68 Changed Class II Aldolase and Adducin N-terminal domain
Aldose_epim PF01263 Family 66 8201 286.20 18 90.64 Changed Aldose 1-epimerase
Aldo_ket_red PF00248 Domain 61 28932 269.00 25 87.49 Changed Aldo/keto reductase family
Ald_Xan_dh_C PF01315 Domain 30 5239 108.20 30 12.95 Changed Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Ald_Xan_dh_C2 PF02738 Domain 30 9467 368.20 19 64.65 Changed Molybdopterin-binding domain of aldehyde dehydrogenase
ALF PF03752 Repeat 42 301 41.90 30 20.81 Changed Short repeats of unknown function
Alg14 PF08660 Family 35 618 156.50 28 77.72 Changed Oligosaccharide biosynthesis protein Alg14 like
ALG3 PF05208 Family 7 352 311.30 39 79.10 Changed ALG3 protein
Alg6_Alg8 PF03155 Family 9 764 353.20 28 86.10 Changed ALG6, ALG8 glycosyltransferase family
AlgF PF11182 Family 13 100 173.80 41 71.82 Changed Alginate O-acetyl transferase AlgF
Alginate_exp PF13372 Domain 23 682 365.20 17 76.18 Changed Alginate export
Alginate_lyase PF05426 Family 59 980 247.60 17 47.74 Changed Alginate lyase
Alginate_lyase2 PF08787 Domain 70 350 224.10 25 77.76 Changed Alginate lyase
ALIX_LYPXL_bnd PF13949 Domain 97 602 282.60 22 30.37 Changed ALIX V-shaped domain binding to HIV
AlkA_N PF06029 Domain 90 1096 115.30 42 29.96 Changed AlkA N-terminal domain
Alkyl_sulf_C PF14864 Domain 140 895 122.00 34 19.64 New Alkyl sulfatase C-terminal
Alkyl_sulf_dimr PF14863 Domain 196 988 139.00 47 22.62 New Alkyl sulfatase dimerisation
Alk_phosphatase PF00245 Domain 10 3561 329.70 28 81.45 Changed Alkaline phosphatase
Allantoicase PF03561 Family 13 1158 143.30 39 75.20 Changed Allantoicase repeat
Allatostatin PF05953 Repeat 21 453 11.20 60 36.41 Changed Allatostatin
Allene_ox_cyc PF06351 Family 10 96 168.90 62 71.60 Changed Allene oxide cyclase
Allexi_40kDa PF05549 Family 7 19 234.20 36 68.90 Changed Allexivirus 40kDa protein
Alliinase_C PF04864 Domain 10 180 318.40 46 79.58 Changed Allinase
ALMS_motif PF15309 Family 17 152 123.80 34 9.40 New ALMS motif
ALMT PF11744 Family 18 320 327.50 31 66.11 Changed Aluminium activated malate transporter
ALO PF04030 Family 34 1395 200.00 21 43.75 Changed D-arabinono-1,4-lactone oxidase
Alpha-2-MRAP_C PF06401 Domain 11 128 200.30 44 62.32 Changed Alpha-2-macroglobulin RAP, C-terminal domain
Alpha-2-MRAP_N PF06400 Domain 10 108 113.90 50 33.65 Changed Alpha-2-macroglobulin RAP, N-terminal domain
Alpha-amylase PF00128 Domain 31 28372 261.10 18 44.76 Changed Alpha amylase, catalytic domain
Alpha-amylase_C PF02806 Domain 246 4792 94.60 25 14.30 Changed Alpha amylase, C-terminal all-beta domain
Alpha-amylase_N PF02903 Domain 38 1507 118.10 30 20.02 Changed Alpha amylase, N-terminal ig-like domain
Alpha-amyl_C PF09071 Domain 5 18 66.80 58 12.17 Changed Alpha-amylase, C terminal
Alpha-amyl_C2 PF07821 Domain 33 290 61.20 48 13.67 Changed Alpha-amylase C-terminal beta-sheet domain
Alpha-E PF04168 Family 180 1295 297.00 26 60.07 Changed A predicted alpha-helical domain with a conserved ER motif.
alpha-hel2 PF14456 Family 11 36 298.60 19 85.51 Changed Alpha-helical domain 2
Alpha-L-AF_C PF06964 Family 145 1287 201.20 22 33.87 Changed Alpha-L-arabinofuranosidase C-terminus
Alpha-mann_mid PF09261 Domain 126 2561 78.00 28 8.09 Changed Alpha mannosidase, middle domain
AlphaC_N PF08829 Domain 5 46 177.50 50 32.35 Changed Alpha C protein N terminal
Alpha_adaptinC2 PF02883 Domain 102 1431 109.40 19 13.69 Changed Adaptin C-terminal domain
Alpha_adaptin_C PF02296 Family 21 349 109.80 43 12.10 Changed Alpha adaptin AP2, C-terminal domain
Alpha_E1_glycop PF01589 Family 17 1920 247.60 48 50.15 Changed Alphavirus E1 glycoprotein
Alpha_E2_glycop PF00943 Family 23 2166 320.80 49 61.18 Changed Alphavirus E2 glycoprotein
Alpha_E3_glycop PF01563 Family 25 939 56.50 63 6.95 Changed Alphavirus E3 glycoprotein
Alpha_GJ PF03229 Family 5 48 92.70 53 76.17 Changed Alphavirus glycoprotein J
Alpha_kinase PF02816 Family 63 765 177.80 24 20.05 Changed Alpha-kinase family
Alpha_L_fucos PF01120 Family 48 2021 324.50 24 62.37 Changed Alpha-L-fucosidase
Alpha_TIF PF02232 Family 13 66 333.00 47 75.87 Changed Alpha trans-inducing protein (Alpha-TIF)
Alph_Pro_TM PF09608 Family 49 249 229.60 36 87.83 Changed Putative transmembrane protein (Alph_Pro_TM)
ALS2CR8 PF15299 Family 33 110 199.60 31 36.09 New Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8
ALS_ss_C PF10369 Family 160 3802 73.70 39 42.97 Changed Small subunit of acetolactate synthase
Alveol-reg_P311 PF11092 Family 4 38 62.60 68 93.40 Changed Neuronal protein 3.1 (p311)
AMA-1 PF02430 Family 7 1565 343.80 69 86.34 Changed Apical membrane antigen 1
Amastin PF07344 Family 76 430 156.20 30 75.97 Changed Amastin surface glycoprotein
Amb_V_allergen PF03913 Family 3 4 42.80 61 62.87 Changed Amb V Allergen
Amdo_NSP PF12475 Family 7 138 46.60 63 33.50 Changed Amdovirus non-structural protein
Amelin PF05111 Family 4 141 207.90 45 100.34 Changed Ameloblastin precursor (Amelin)
Amelogenin PF02948 Family 6 451 113.20 52 97.18 Changed Amelogenin
amfpi-1 PF12190 Family 2 9 85.00 68 91.29 Changed Fungal protease inhibitor
AMH_N PF04709 Family 13 109 261.20 30 66.38 Changed Anti-Mullerian hormone, N terminal region
Amidase PF01425 Family 44 12240 393.40 26 83.65 Changed Amidase
Amidase02_C PF12123 Domain 16 260 44.60 42 18.36 Changed N-acetylmuramoyl-l-alanine amidase
Amidase_2 PF01510 Domain 117 7328 140.50 22 44.18 Changed N-acetylmuramoyl-L-alanine amidase
Amidase_3 PF01520 Family 103 7380 194.90 29 50.10 Changed N-acetylmuramoyl-L-alanine amidase
Amidase_5 PF05382 Family 8 235 134.80 28 32.91 Changed Bacteriophage peptidoglycan hydrolase
Amidase_6 PF12671 Domain 83 491 158.20 30 49.09 Changed Putative amidase domain
Amidinotransf PF02274 Family 55 3546 321.90 24 89.76 Changed Amidinotransferase
Amidohydro_1 PF01979 Domain 58 18418 289.10 14 66.61 Changed Amidohydrolase family
Amidohydro_2 PF04909 Domain 132 6287 284.10 13 85.76 Changed Amidohydrolase
Amidohydro_3 PF07969 Family 43 5270 377.00 18 74.72 Changed Amidohydrolase family
Amidohydro_4 PF13147 Domain 111 10639 309.00 16 70.36 Changed Amidohydrolase
Amidohydro_5 PF13594 Domain 1248 3712 75.40 25 16.55 Changed Amidohydrolase
Amidoligase_2 PF12224 Family 53 463 231.20 19 63.15 Changed Putative amidoligase enzyme
Amido_AtzD_TrzD PF09663 Family 10 66 335.60 48 98.20 Changed Amidohydrolase ring-opening protein (Amido_AtzD_TrzD)
AMIN PF11741 Family 172 2653 99.40 24 20.71 Changed AMIN domain
Aminoglyc_resit PF10706 Family 3 186 140.20 38 79.89 Changed Aminoglycoside-2''-adenylyltransferase
Aminotran_1_2 PF00155 Domain 48 52439 337.30 17 82.76 Changed Aminotransferase class I and II
Aminotran_3 PF00202 Domain 18 23135 322.10 28 72.23 Changed Aminotransferase class-III
Aminotran_4 PF01063 Domain 78 10610 228.80 22 69.44 Changed Aminotransferase class IV
Aminotran_5 PF00266 Domain 45 23746 338.30 19 85.74 Changed Aminotransferase class-V
Aminotran_MocR PF12897 Family 5 444 413.70 53 97.54 Changed Alanine-glyoxylate amino-transferase
Amino_oxidase PF01593 Domain 84 8963 357.50 13 77.77 Changed Flavin containing amine oxidoreductase
AmiS_UreI PF02293 Family 24 489 180.40 56 94.65 Changed AmiS/UreI family transporter
AMMECR1 PF01871 Family 76 937 170.30 30 62.01 Changed AMMECR1
Ammonium_transp PF00909 Family 25 6224 367.80 30 87.31 Changed Ammonium Transporter Family
Amnionless PF14828 Family 16 114 313.20 24 83.41 New Amnionless
AMNp_N PF10423 Domain 67 952 159.40 47 32.95 Changed Bacterial AMP nucleoside phosphorylase N-terminus
AMO PF02461 Family 8 15067 149.70 61 93.12 Changed Ammonia monooxygenase
AmoA PF05145 Family 8 1520 282.70 30 90.48 Changed Putative ammonia monooxygenase
AmoC PF04896 Family 9 127 191.30 46 94.37 Changed Ammonia monooxygenase/methane monooxygenase, subunit C
AMOP PF03782 Domain 15 277 146.50 32 15.41 Changed AMOP domain
AMP-binding PF00501 Family 354 67453 376.00 19 52.12 Changed AMP-binding enzyme
AMP-binding_C PF13193 Domain 574 45096 76.60 27 9.63 Changed AMP-binding enzyme C-terminal domain
AMP-binding_C_2 PF14535 Domain 244 1758 94.80 32 21.53 New AMP-binding enzyme C-terminal domain
AMPKBI PF04739 Family 56 516 114.60 35 32.87 Changed 5'-AMP-activated protein kinase beta subunit, interation domain
AMP_N PF05195 Domain 154 2593 135.80 28 29.60 Changed Aminopeptidase P, N-terminal domain
ANAPC15 PF15243 Family 25 114 93.20 45 78.43 New Anaphase-promoting complex subunit 15
ANATO PF01821 Domain 65 552 35.50 37 3.14 Changed Anaphylotoxin-like domain
Androgen_recep PF02166 Family 3 248 263.10 50 56.51 Changed Androgen receptor
Anemone_cytotox PF06369 Family 3 46 153.10 36 87.33 Changed Sea anemone cytotoxic protein
AnfG_VnfG PF03139 Family 20 108 111.80 49 82.15 Changed Vanadium/alternative nitrogenase delta subunit
AnfO_nitrog PF09582 Family 14 61 200.20 27 92.49 Changed Iron only nitrogenase protein AnfO (AnfO_nitrog)
ANF_receptor PF01094 Family 119 7015 312.90 15 40.55 Changed Receptor family ligand binding region
Angiomotin_C PF12240 Family 8 207 196.00 58 24.48 Changed Angiomotin C terminal
Anillin PF08174 Domain 70 383 146.60 19 15.15 Changed Cell division protein anillin
Ank PF00023 Repeat 1072 8812 32.40 29 5.11 Changed Ankyrin repeat
ANKH PF07260 Family 2 82 277.50 65 67.24 Changed Progressive ankylosis protein (ANKH)
Ank_2 PF12796 Family 620 110723 89.50 23 36.39 Changed Ankyrin repeats (3 copies)
Ank_3 PF13606 Repeat 248 446 30.10 27 4.47 Changed Ankyrin repeat
Ank_4 PF13637 Domain 86 7425 53.50 28 8.01 Changed Ankyrin repeats (many copies)
Ank_5 PF13857 Domain 81 5157 54.20 29 7.93 Changed Ankyrin repeats (many copies)
Annexin PF00191 Family 177 6936 64.80 29 64.50 Changed Annexin
Anoctamin PF04547 Family 102 1393 444.10 27 58.75 Changed Calcium-activated chloride channel
Anophelin PF10731 Family 4 8 64.60 58 71.31 Changed Thrombin inhibitor from mosquito
ANP PF00212 Family 39 340 32.00 49 25.16 Changed Atrial natriuretic peptide
Anp1 PF03452 Family 49 428 260.40 42 61.82 Changed Anp1
ANT PF03374 Family 66 1631 109.40 28 45.26 Changed Phage antirepressor protein KilAC domain
AntA PF08346 Family 57 810 70.80 41 31.26 Changed AntA/AntB antirepressor
ANTAR PF03861 Domain 179 2458 56.00 30 24.33 Changed ANTAR domain
ANTH PF07651 Domain 29 1195 243.60 25 36.38 Changed ANTH domain
Anthrax-tox_M PF09156 Domain 2 16 259.30 97 36.03 Changed Anthrax toxin lethal factor, middle domain
Anthrax_toxA PF03497 Family 7 96 173.00 35 16.76 Changed Anthrax toxin LF subunit
Anth_Ig PF05587 Domain 12 190 102.50 51 22.00 Changed Anthrax receptor extracellular domain
Anth_synt_I_N PF04715 Family 111 5751 145.90 22 28.89 Changed Anthranilate synthase component I, N terminal region
Anti-adapt_IraP PF10796 Family 8 516 84.70 75 97.83 Changed Sigma-S stabilisation anti-adaptor protein
Antibiotic_NAT PF02522 Family 52 757 200.70 28 82.97 Changed Aminoglycoside 3-N-acetyltransferase
Anticodon_1 PF08264 Domain 171 17806 145.80 20 16.55 Changed Anticodon-binding domain of tRNA
Antifungal_pept PF11410 Family 8 33 33.30 43 33.95 Changed Antifungal peptide
Antifungal_prot PF11402 Family 6 27 52.00 53 56.43 Changed Antifungal protein
Antigen_Bd37 PF11641 Family 4 14 205.90 60 73.07 Changed Glycosylphosphatidylinositol-anchored merozoite surface protein
Antig_Caf1 PF09255 Domain 2 29 107.20 85 82.49 Changed Caf1 Capsule antigen
Antimicrobial10 PF08105 Family 2 13 51.90 66 99.70 Changed Metchnikowin family
Antimicrobial11 PF08106 Family 2 2 16.00 88 100.00 Changed Formaecin family
Antimicrobial12 PF08107 Family 4 43 39.40 46 61.12 Changed Pleurocidin family
Antimicrobial13 PF08108 Family 2 3 15.00 100 34.88 Changed Halocidin family
Antimicrobial14 PF08109 Family 2 2 31.00 100 72.94 Changed Lactocin 705 family
Antimicrobial15 PF08110 Family 3 5 19.00 62 81.20 Changed Ocellatin family
Antimicrobial17 PF08129 Family 2 7 46.40 57 90.78 Changed Alpha/beta enterocin family
Antimicrobial18 PF08130 Family 2 6 53.30 58 100.00 Changed Type A lantibiotic family
Antimicrobial19 PF08225 Family 2 4 23.00 78 97.87 Changed Pseudin antimicrobial peptide
Antimicrobial20 PF08256 Family 14 32 13.00 62 70.70 Changed Aurein-like antibiotic peptide
Antimicrobial21 PF14861 Domain 22 86 31.30 45 52.48 New Plant antimicrobial peptide
Antimicrobial_1 PF08018 Family 26 221 23.70 54 39.09 Changed Frog antimicrobial peptide
Antimicrobial_2 PF08023 Family 18 473 32.20 38 49.17 Changed Frog antimicrobial peptide
Antimicrobial_3 PF08025 Family 2 4 37.00 84 100.00 Changed Spider antimicrobial peptide
Antimicrobial_4 PF08024 Family 5 7 23.40 51 94.80 Changed Ant antimicrobial peptide
Antimicrobial_5 PF08026 Family 2 26 33.30 73 63.28 Changed Bee antimicrobial peptide
Antimicrobial_6 PF08036 Family 3 10 39.60 52 63.36 Changed Diapausin family of antimicrobial peptide
Antimicrobial_7 PF08102 Family 4 7 42.00 60 67.59 Changed Scorpion antimicrobial peptide
Antimicrobial_8 PF08103 Family 4 7 17.00 59 100.00 Changed Uperin family
Antimicrobial_9 PF08104 Family 2 2 24.00 96 100.00 Changed Ponericin L family
Antirestrict PF03230 Family 27 1097 95.40 57 64.17 Changed Antirestriction protein
Antistasin PF02822 Family 60 460 27.10 43 9.73 Changed Antistasin family
Antiterm PF03589 Domain 21 1401 94.20 30 76.57 Changed Antitermination protein
Antitoxin-MazE PF04014 Domain 145 4979 45.50 23 42.49 Changed Antidote-toxin recognition MazE
Ant_C PF05586 Family 10 141 91.80 65 19.15 Changed Anthrax receptor C-terminus region
An_peroxidase PF03098 Family 123 2338 385.50 22 55.96 Changed Animal haem peroxidase
AOX PF01786 Family 60 637 195.30 41 67.21 Changed Alternative oxidase
AP-5_subunit_s1 PF15001 Family 10 72 166.60 42 86.40 New AP-5 complex subunit sigma-1
AP2 PF00847 Domain 206 5868 52.10 39 17.05 Changed AP2 domain
AP3B1_C PF14796 Family 25 196 141.10 38 13.89 New Clathrin-adaptor complex-3 beta-1 subunit C-terminal
AP4E_app_platf PF14807 Domain 12 75 102.90 41 9.81 New Adaptin AP4 complex epsilon appendage platform
ApbA PF02558 Family 98 4828 147.80 22 45.49 Changed Ketopantoate reductase PanE/ApbA
ApbA_C PF08546 Family 112 4691 124.90 25 38.00 Changed Ketopantoate reductase PanE/ApbA C terminal
ApbE PF02424 Family 245 4122 240.90 28 74.58 Changed ApbE family
Apc1 PF12859 Family 57 240 101.60 27 6.01 Changed Anaphase-promoting complex subunit 1
APC10 PF03256 Family 7 646 165.50 26 13.97 Changed Anaphase-promoting complex, subunit 10 (APC10)
Apc13p PF05839 Family 7 186 81.00 31 56.67 Changed Apc13p protein
Apc15p PF05841 Family 27 114 115.10 25 31.83 Changed Apc15p protein
APC2 PF08672 Domain 18 240 59.20 40 7.61 Changed Anaphase promoting complex (APC) subunit 2
Apc3 PF12895 Domain 111 1548 82.70 18 13.86 Changed Anaphase-promoting complex, cyclosome, subunit 3
Apc4 PF12896 Domain 36 264 197.50 24 26.91 Changed Anaphase-promoting complex, cyclosome, subunit 4
Apc4_WD40 PF12894 Domain 29 282 47.10 26 6.94 Changed Anaphase-promoting complex subunit 4 WD40 domain
Apc5 PF12862 Domain 26 461 89.20 21 16.11 Changed Anaphase-promoting complex subunit 5
APC8 PF04049 Family 26 298 146.10 29 24.42 Changed Anaphase promoting complex subunit 8 / Cdc23
Apc9 PF12856 Family 15 42 117.30 28 33.36 Changed Anaphase-promoting complex subunit 9
APCDDC PF14921 Domain 11 205 199.50 39 81.35 New Adenomatosis polyposis coli down-regulated 1
APC_15aa PF05972 Motif 9 272 16.00 53 1.96 Changed APC 15 residue motif
APC_basic PF05956 Motif 4 93 308.10 51 13.43 Changed APC basic domain
APC_CDC26 PF10471 Family 42 164 79.20 22 53.31 Changed Anaphase-promoting complex APC subunit 1
APC_crr PF05923 Motif 30 697 25.90 45 5.86 Changed APC cysteine-rich region
Apelin PF15360 Family 8 19 54.80 67 72.82 New APJ endogenous ligand
APG12 PF04110 Family 6 282 83.60 40 53.46 Changed Ubiquitin-like autophagy protein Apg12
APG17 PF04108 Family 19 172 344.20 21 54.31 Changed Autophagy protein Apg17
APG5 PF04106 Family 34 341 200.20 30 65.17 Changed Autophagy protein Apg5
APG6 PF04111 Family 99 445 294.70 35 65.03 Changed Autophagy protein Apg6
APG9 PF04109 Family 36 425 322.60 36 42.59 Changed Autophagy protein Apg9
APH PF01636 Family 244 16611 227.30 12 63.11 Changed Phosphotransferase enzyme family
Aph-1 PF06105 Family 14 233 207.00 40 91.12 Changed Aph-1 protein
AphA_like PF14557 Domain 5 13 175.10 40 93.05 New Putative AphA-like transcriptional regulator
APH_6_hur PF04655 Family 9 681 215.90 33 83.38 Changed Aminoglycoside/hydroxyurea antibiotic resistance kinase
API5 PF05918 Family 3 205 385.30 36 88.30 Changed Apoptosis inhibitory protein 5 (API5)
Apidaecin PF00807 Family 2 104 27.70 92 82.49 Changed Apidaecin
Apis_Csd PF11671 Family 5 496 126.60 68 61.76 Changed Complementary sex determiner protein
Apo-CII PF05355 Family 6 40 73.00 46 75.96 Changed Apolipoprotein C-II
Apo-CIII PF05778 Family 6 42 65.00 61 62.42 Changed Apolipoprotein CIII (Apo-CIII)
Apo-VLDL-II PF05418 Family 3 14 75.10 74 79.88 Changed Apovitellenin I (Apo-VLDL-II)
ApoA-II PF04711 Family 5 38 73.20 61 73.18 Changed Apolipoprotein A-II (ApoA-II)
ApoB100_C PF12491 Family 4 81 44.40 75 2.02 Changed Apolipoprotein B100 C terminal
APOBEC_C PF05240 Domain 45 86 54.00 44 23.25 Changed APOBEC-like C-terminal domain
APOBEC_N PF08210 Domain 22 683 172.70 33 80.64 Changed APOBEC-like N-terminal domain
ApoC-I PF04691 Family 6 41 55.00 47 71.03 Changed Apolipoprotein C-I (ApoC-1)
APOC4 PF15119 Family 6 27 92.60 62 78.88 New Apolipoprotein C4
Apocytochr_F_C PF01333 Domain 49 697 114.80 74 37.15 Changed Apocytochrome F, C-terminal
ApoL PF05461 Family 21 365 241.10 27 74.16 Changed Apolipoprotein L
Apolipoprotein PF01442 Domain 46 1816 196.40 12 86.35 Changed Apolipoprotein A1/A4/E domain
Apolipo_F PF15148 Family 8 40 180.80 47 61.13 New Apolipoprotein F
ApoLp-III PF07464 Family 8 45 143.30 27 77.83 Changed Apolipophorin-III precursor (apoLp-III)
ApoM PF11032 Family 4 77 164.30 37 93.66 Changed Apolipoprotein M (ApoM)
ApoO PF09769 Family 36 346 151.40 23 63.87 Changed Apolipoprotein O
APO_RNA-bind PF05634 Family 7 186 158.30 36 77.96 Changed APO RNA-binding
APP_amyloid PF10515 Family 9 380 51.60 67 8.22 Changed beta-amyloid precursor protein C-terminus
APP_Cu_bd PF12924 Domain 17 340 57.50 64 8.54 Changed Copper-binding of amyloid precursor, CuBD
APP_E2 PF12925 Domain 11 385 175.40 59 27.13 Changed E2 domain of amyloid precursor protein
APP_N PF02177 Domain 15 356 98.20 60 14.97 Changed Amyloid A4 N-terminal heparin-binding
Apq12 PF12716 Family 34 86 52.00 27 30.96 Changed Nuclear pore assembly and biogenesis
APS-reductase_C PF12139 Family 43 261 83.70 48 62.12 Changed Adenosine-5'-phosphosulfate reductase beta subunit
APS_kinase PF01583 Domain 20 3100 154.70 50 43.89 Changed Adenylylsulphate kinase
APT PF03440 Domain 5 77 81.00 49 19.25 Changed Aerolysin/Pertussis toxin (APT) domain
Apt1 PF10351 Family 41 368 417.80 21 19.93 Changed Golgi-body localisation protein domain
Apyrase PF06079 Family 20 238 249.00 43 77.24 Changed Apyrase
AP_endonuc_2 PF01261 Domain 311 17202 209.50 15 68.04 Changed Xylose isomerase-like TIM barrel
AP_endonuc_2_N PF07582 Family 56 878 53.10 34 16.20 Changed AP endonuclease family 2 C terminus
ARA70 PF12489 Family 17 169 127.10 39 44.89 Changed Nuclear coactivator
ArabFuran-catal PF09206 Domain 7 132 312.70 58 63.03 Changed Alpha-L-arabinofuranosidase B, catalytic
Arabinose_bd PF12625 Domain 221 2712 180.40 18 52.86 Changed Arabinose-binding domain of AraC transcription regulator, N-term
Arabinose_Isome PF02610 Family 38 1076 349.80 58 71.66 Changed L-arabinose isomerase
Arabinose_Iso_C PF11762 Domain 38 1016 114.70 58 23.32 Changed L-arabinose isomerase C-terminal domain
Arabinose_trans PF04602 Family 7 497 565.40 47 61.09 Changed Mycobacterial cell wall arabinan synthesis protein
Arabino_trans_C PF14896 Domain 7 454 346.80 41 34.95 New EmbC C-terminal domain
AraC_binding PF02311 Domain 58 10833 132.60 12 46.69 Changed AraC-like ligand binding domain
AraC_binding_2 PF14525 Domain 230 1819 174.60 16 52.75 New AraC-binding-like domain
AraC_N PF06719 Family 170 1635 152.60 33 50.71 Changed AraC-type transcriptional regulator N-terminus
Arb1 PF09692 Family 11 86 321.70 29 75.91 Changed Argonaute siRNA chaperone (ARC) complex subunit Arb1
Arb2 PF09757 Family 43 409 154.40 20 27.75 Changed Arb2 domain
Arc PF03869 Family 3 753 46.50 30 53.16 Changed Arc-like DNA binding domain
Archaeal_AmoA PF12942 Family 8 13679 177.80 85 90.34 Changed Archaeal ammonia monooxygenase subunit A (AmoA)
Archease PF01951 Domain 96 503 134.80 29 85.80 Changed Archease protein family (MTH1598/TM1083)
Arch_ATPase PF01637 Family 56 1765 203.60 17 44.02 Changed Archaeal ATPase
Arch_flagellin PF01917 Family 114 362 185.90 22 88.87 Changed Archaebacterial flagellin
Arch_fla_DE PF04659 Family 22 97 97.30 34 28.55 Changed Archaeal flagella protein
Arc_PepC PF06819 Domain 10 35 111.70 35 30.52 Changed Archaeal Peptidase A24 C-terminal Domain
Arc_PepC_II PF06847 Domain 21 99 90.10 24 34.07 Changed Archaeal Peptidase A24 C-terminus Type II
Arc_trans_TRASH PF08394 Family 8 65 36.70 39 22.76 Changed Archaeal TRASH domain
ARD PF03079 Family 11 964 149.50 30 82.56 Changed ARD/ARD' family
ArdA PF07275 Family 38 992 159.80 30 62.10 Changed Antirestriction protein (ArdA)
AreA_N PF07573 Family 7 19 82.60 56 9.91 Changed Nitrogen regulatory protein AreA N terminus
Arena_glycoprot PF00798 Family 20 431 309.30 46 98.66 Changed Arenavirus glycoprotein
Arena_nucleocap PF00843 Family 17 468 313.20 54 96.85 Changed Arenavirus nucleocapsid protein
Arena_RNA_pol PF06317 Family 14 233 1086.60 42 99.88 Changed Arenavirus RNA polymerase
Arf PF00025 Domain 20 5460 161.80 36 79.30 Changed ADP-ribosylation factor family
ARF7EP_C PF14949 Family 25 126 103.30 45 54.39 New ARF7 effector protein C-terminus
Arfaptin PF06456 Domain 11 535 209.60 33 55.43 Changed Arfaptin-like domain
ArfGap PF01412 Domain 141 3394 114.20 32 18.59 Changed Putative GTPase activating protein for Arf
Arginase PF00491 Domain 347 5883 269.20 24 85.75 Changed Arginase family
Arginosuc_synth PF00764 Family 12 4339 374.20 40 92.38 Changed Arginosuccinate synthase
ArgJ PF01960 Family 139 2527 371.30 40 94.80 Changed ArgJ family
ArgK PF03308 Family 9 1738 266.50 40 60.95 Changed ArgK protein
ARGLU PF15346 Family 19 163 130.50 45 54.99 New Arginine and glutamate-rich 1
Argos PF11581 Family 3 39 93.60 46 41.30 Changed Antagonist of EGFR signalling, Argos
Arg_repressor PF01316 Domain 10 4229 69.40 34 44.70 Changed Arginine repressor, DNA binding domain
Arg_repressor_C PF02863 Domain 146 4296 69.90 29 45.54 Changed Arginine repressor, C-terminal domain
Arg_tRNA_synt_N PF03485 Domain 174 5094 86.10 28 15.38 Changed Arginyl tRNA synthetase N terminal domain
ARHGEF5_35 PF15441 Family 11 32 418.10 51 33.63 New Rho guanine nucleotide exchange factor 5/35
ARID PF01388 Domain 53 1730 89.90 29 8.00 Changed ARID/BRIGHT DNA binding domain
Arif-1 PF06770 Family 17 37 193.90 30 63.07 Changed Actin-rearrangement-inducing factor (Arif-1)
ARL2_Bind_BART PF11527 Family 32 294 113.80 29 40.86 Changed The ARF-like 2 binding protein BART
ARL6IP6 PF15062 Family 11 55 75.40 48 36.26 New Haemopoietic lineage transmembrane helix
Arm PF00514 Repeat 242 12724 40.80 24 18.23 Changed Armadillo/beta-catenin-like repeat
Armet PF10208 Family 8 204 131.40 47 65.87 Changed Degradation arginine-rich protein for mis-folding
Arm_2 PF04826 Family 11 392 217.60 29 44.07 Changed Armadillo-like
AroM PF07302 Family 15 531 220.50 70 98.21 Changed AroM protein
Aromatic_hydrox PF11723 Domain 7 55 216.30 38 59.09 Changed Homotrimeric ring hydroxylase
ARPC4 PF05856 Family 21 366 158.30 66 89.93 Changed ARP2/3 complex 20 kDa subunit (ARPC4)
Arr-ms PF12120 Domain 15 184 99.60 62 64.61 Changed Rifampin ADP-ribosyl transferase
Arrestin_C PF02752 Domain 173 1981 151.20 19 30.82 Changed Arrestin (or S-antigen), C-terminal domain
Arrestin_N PF00339 Domain 42 2044 138.80 19 29.63 Changed Arrestin (or S-antigen), N-terminal domain
ARS2 PF04959 Family 8 282 200.40 25 26.08 Changed Arsenite-resistance protein 2
ArsA_ATPase PF02374 Family 11 2686 239.70 25 76.97 Changed Anion-transporting ATPase
ArsB PF02040 Family 4 1841 367.80 44 95.11 Changed Arsenical pump membrane protein
ArsC PF03960 Family 36 7591 107.40 26 86.65 Changed ArsC family
ArsD PF06953 Domain 38 439 115.90 37 90.33 Changed Arsenical resistance operon trans-acting repressor ArsD
ArsR PF09824 Family 12 29 160.40 40 94.30 Changed ArsR transcriptional regulator
ART PF01129 Family 9 454 201.40 31 63.26 Changed NAD:arginine ADP-ribosyltransferase
Arteri_env PF01606 Family 3 333 211.30 78 82.56 Changed Arterivirus envelope protein
Arteri_Gl PF00951 Family 11 8906 171.80 75 86.54 Changed Arterivirus GL envelope glycoprotein
Arteri_GP4 PF02497 Family 3 241 176.90 80 99.36 Changed Arterivirus glycoprotein
Arteri_nucleo PF01481 Family 4 700 110.20 70 93.69 Changed Arterivirus nucleocapsid protein
Arv1 PF04161 Family 21 319 176.80 27 62.27 Changed Arv1-like family
Arylesterase PF01731 Family 6 216 84.20 42 23.51 Changed Arylesterase
Arylsulfotrans PF05935 Family 33 999 451.30 30 83.36 Changed Arylsulfotransferase (ASST)
Arylsulfotran_2 PF14269 Family 23 447 268.60 28 56.51 Changed Arylsulfotransferase (ASST)
ASC PF00858 Family 114 2052 339.30 17 78.79 Changed Amiloride-sensitive sodium channel
ASCH PF04266 Domain 85 2885 108.40 21 70.36 Changed ASCH domain
ASD1 PF08688 Family 8 137 156.60 34 12.14 Changed Apx/Shroom domain ASD1
ASD2 PF08687 Family 14 259 247.60 41 24.19 Changed Apx/Shroom domain ASD2
ASF1_hist_chap PF04729 Family 24 449 145.60 53 66.27 Changed ASF1 like histone chaperone
ASFV_360 PF01671 Family 14 126 205.90 43 60.99 Changed African swine fever virus multigene family 360 protein
ASFV_J13L PF05568 Family 2 103 169.90 80 100.57 Changed African swine fever virus J13L protein
ASFV_L11L PF05293 Family 2 12 77.30 92 93.55 Changed African swine fever virus (ASFV) L11L protein
ASFV_p27 PF06556 Family 2 20 129.00 90 57.50 Changed IAP-like protein p27 C-terminus
Ashwin PF15323 Family 17 75 183.50 38 84.61 New Developmental protein
AsiA PF09010 Domain 6 30 88.50 46 97.68 Changed Anti-Sigma Factor A
ASL_C PF08328 Family 107 1767 115.00 62 25.35 Changed Adenylosuccinate lyase C-terminal
ASL_C2 PF14698 Domain 617 4020 70.50 40 15.17 New Argininosuccinate lyase C-terminal
AsmA PF05170 Family 12 3636 400.20 19 70.17 Changed AsmA family
AsmA_1 PF13109 Family 21 213 212.80 47 23.87 Changed AsmA-like C-terminal region
AsmA_2 PF13502 Family 168 2606 219.90 17 21.31 Changed AsmA-like C-terminal region
AsnA PF03590 Family 6 1603 236.20 56 72.62 Changed Aspartate-ammonia ligase
AsnC_trans_reg PF01037 Family 263 13775 73.20 21 46.93 Changed AsnC family
Asn_synthase PF00733 Domain 104 5876 248.10 24 44.92 Changed Asparagine synthase
Asp PF00026 Family 23 4762 282.30 24 71.72 Changed Eukaryotic aspartyl protease
Asp-Al_Ex PF06826 Family 34 4439 168.70 31 61.72 Changed Predicted Permease Membrane Region
Asp-B-Hydro_N PF05279 Family 9 236 177.80 40 49.29 Changed Aspartyl beta-hydroxylase N-terminal region
Asp23 PF03780 Family 173 4865 105.20 28 72.18 Changed Asp23 family
Asparaginase PF00710 Domain 157 5341 305.20 30 90.15 Changed Asparaginase
Asparaginase_2 PF01112 Domain 7 2653 259.80 32 88.17 Changed Asparaginase
Asparaginase_II PF06089 Family 87 514 313.30 37 94.11 Changed L-asparaginase II
Aspzincin_M35 PF14521 Domain 34 226 142.80 27 48.57 New Lysine-specific metallo-endopeptidase
Asp_Arg_Hydrox PF05118 Family 11 1101 146.90 31 44.69 Changed Aspartyl/Asparaginyl beta-hydroxylase
Asp_decarbox PF02261 Domain 163 2477 115.10 52 89.57 Changed Aspartate decarboxylase
Asp_Glu_race PF01177 Family 177 8372 210.50 21 83.24 Changed Asp/Glu/Hydantoin racemase
Asp_Glu_race_2 PF14669 Family 3 28 222.80 63 15.17 New Putative aspartate racemase
Asp_protease PF09668 Family 12 445 118.70 41 29.40 Changed Aspartyl protease
Asp_protease_2 PF13650 Domain 300 2359 91.40 19 17.90 Changed Aspartyl protease
Asr PF06392 Repeat 8 470 19.30 85 18.79 Changed Acid shock protein repeat
ASRT PF07100 Family 25 78 117.60 44 90.17 Changed Anabaena sensory rhodopsin transducer
AstA PF04958 Family 71 1133 330.90 51 97.92 Changed Arginine N-succinyltransferase beta subunit
Astacin PF01400 Domain 26 2029 172.70 33 37.99 Changed Astacin (Peptidase family M12A)
AstB PF04996 Family 4 825 429.90 67 99.25 Changed Succinylarginine dihydrolase
AstE_AspA PF04952 Family 33 2822 264.10 21 80.56 Changed Succinylglutamate desuccinylase / Aspartoacylase family
Astro_capsid PF03115 Family 11 1664 200.70 66 92.28 Changed Astrovirus capsid protein precursor
Astro_capsid_p PF12226 Family 3 174 208.40 83 61.93 Changed Turkey astrovirus capsid protein
ASXH PF13919 Domain 85 311 133.90 41 12.83 Changed Asx homology domain
ATAD4 PF15321 Family 28 78 89.60 47 75.69 New ATPase family AAA domain containing 4
ATC_hydrolase PF14196 Family 62 369 152.10 18 73.90 Changed L-2-amino-thiazoline-4-carboxylic acid hydrolase
ATE_C PF04377 Family 166 1296 134.00 35 43.75 Changed Arginine-tRNA-protein transferase, C terminus
ATE_N PF04376 Family 128 1240 77.30 35 25.38 Changed Arginine-tRNA-protein transferase, N terminus
ATG11 PF10377 Family 28 284 141.20 27 11.99 Changed Autophagy-related protein 11
ATG13 PF10033 Family 38 337 203.60 28 31.14 Changed Autophagy-related protein 13
Atg14 PF10186 Family 39 520 295.80 16 56.42 Changed UV radiation resistance protein and autophagy-related subunit 14
ATG16 PF08614 Family 16 330 170.80 25 44.66 Changed Autophagy protein 16 (ATG16)
ATG19_autophagy PF12744 Domain 10 35 228.10 40 50.46 Changed Autophagy protein Atg19, Atg8-binding
ATG22 PF11700 Family 50 1392 417.40 25 93.84 Changed Vacuole effluxer Atg22 like
ATG27 PF09451 Family 14 241 221.90 18 72.68 Changed Autophagy-related protein 27
ATG2_CAD PF13329 Family 37 161 145.80 25 7.67 Changed Autophagy-related protein 2 CAD motif
Atg31 PF09795 Family 5 24 177.00 53 99.48 Changed Autophagy-related protein 31
Atg8 PF02991 Domain 9 1011 100.50 47 79.62 Changed Autophagy protein Atg8 ubiquitin like
ATG_C PF09333 Family 36 689 95.20 27 4.20 Changed ATG C terminal domain
ATHILA PF03078 Family 11 113 201.90 16 53.65 Changed ATHILA ORF-1 family
ATLF PF07737 Domain 4 70 187.20 36 41.50 Changed Anthrax toxin lethal factor, N- and C-terminal domain
ATP-cone PF03477 Domain 133 9433 89.30 26 18.76 Changed ATP cone domain
ATP-grasp PF02222 Family 23 5314 171.00 35 44.36 Changed ATP-grasp domain
ATP-grasp_2 PF08442 Domain 22 4398 194.30 40 47.81 Changed ATP-grasp domain
ATP-grasp_3 PF02655 Family 18 304 163.10 22 44.85 Changed ATP-grasp domain
ATP-grasp_4 PF13535 Domain 109 4886 172.70 17 35.99 Changed ATP-grasp domain
ATP-grasp_5 PF13549 Domain 220 2119 216.30 36 28.42 Changed ATP-grasp domain
ATP-gua_Ptrans PF00217 Domain 115 3578 185.20 48 68.74 Changed ATP:guanido phosphotransferase, C-terminal catalytic domain
ATP-gua_PtransN PF02807 Domain 91 1908 67.60 62 24.46 Changed ATP:guanido phosphotransferase, N-terminal domain
ATP-sulfurylase PF01747 Domain 113 1308 214.80 37 43.51 Changed ATP-sulfurylase
ATP-synt PF00231 Domain 161 5197 281.00 34 97.64 Changed ATP synthase
ATP-synt_10 PF05176 Family 23 186 237.20 27 80.37 Changed ATP10 protein
ATP-synt_8 PF00895 Family 66 6876 52.90 39 95.77 Changed ATP synthase protein 8
ATP-synt_A PF00119 Domain 30 17567 204.40 33 91.02 Changed ATP synthase A chain
ATP-synt_ab PF00006 Family 157 33595 206.20 38 47.96 Changed ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C PF00306 Domain 150 20853 103.40 33 21.66 Changed ATP synthase alpha/beta chain, C terminal domain
ATP-synt_ab_N PF02874 Domain 196 22044 65.20 30 14.01 Changed ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_B PF00430 Family 27 5963 130.10 24 75.06 Changed ATP synthase B/B' CF(0)
ATP-synt_C PF00137 Family 167 10204 66.90 28 77.67 Changed ATP synthase subunit C
ATP-synt_D PF01813 Family 114 1524 187.10 30 85.70 Changed ATP synthase subunit D
ATP-synt_DE PF00401 Domain 179 3444 48.40 37 35.06 Changed ATP synthase, Delta/Epsilon chain, long alpha-helix domain
ATP-synt_DE_N PF02823 Domain 327 5637 79.90 32 59.02 Changed ATP synthase, Delta/Epsilon chain, beta-sandwich domain
ATP-synt_E PF05680 Family 17 264 78.20 28 86.96 Changed ATP synthase E chain
ATP-synt_Eps PF04627 Family 30 309 49.00 38 53.74 Changed Mitochondrial ATP synthase epsilon chain
ATP-synt_E_2 PF08112 Family 2 15 50.40 71 92.87 Changed ATP synthase epsilon subunit
ATP-synt_F PF01990 Family 100 1179 94.90 28 86.32 Changed ATP synthase (F/14-kDa) subunit
ATP-synt_F6 PF05511 Family 17 159 92.10 42 71.49 Changed Mitochondrial ATP synthase coupling factor 6
ATP-synt_G PF04718 Family 37 369 99.30 30 72.48 Changed Mitochondrial ATP synthase g subunit
ATP-synt_J PF04911 Family 18 106 52.30 45 78.02 Changed ATP synthase j chain
ATP-synt_S1 PF05827 Family 31 258 286.90 23 83.89 Changed Vacuolar ATP synthase subunit S1 (ATP6S1)
ATP11 PF06644 Family 22 313 231.70 28 77.06 Changed ATP11 protein
ATP12 PF07542 Family 100 585 126.20 35 43.45 Changed ATP12 chaperone protein
ATP13 PF12921 Family 14 101 128.60 24 20.08 Changed Mitochondrial ATPase expression
ATP1G1_PLM_MAT8 PF02038 Family 23 266 49.20 42 44.01 Changed ATP1G1/PLM/MAT8 family
ATPase-cat_bd PF12156 Family 88 725 83.30 30 10.60 Changed Putative metal-binding domain of cation transport ATPase
ATPase_gene1 PF09527 Family 277 1319 54.40 25 56.48 Changed Putative F0F1-ATPase subunit (ATPase_gene1)
ATPgrasp_ST PF14397 Family 11 400 268.40 35 78.98 Changed Sugar-transfer associated ATP-grasp
ATPgrasp_Ter PF15632 Family 99 206 327.20 42 96.59 New ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_TupA PF14305 Family 14 355 230.60 28 73.88 Changed TupA-like ATPgrasp
ATPgrasp_YheCD PF14398 Family 14 572 256.60 26 65.71 Changed YheC/D like ATP-grasp
AtpR PF12966 Family 38 110 85.70 30 84.35 Changed N-ATPase, AtpR subunit
ATP_bind_1 PF03029 Family 30 1967 206.90 26 79.02 Changed Conserved hypothetical ATP binding protein
ATP_bind_2 PF03668 Family 4 3506 275.40 43 93.34 Changed P-loop ATPase protein family
ATP_bind_3 PF01171 Family 33 7781 174.70 26 46.74 Changed PP-loop family
ATP_bind_4 PF01902 Family 6 870 206.10 27 57.01 Changed ATP-binding region
ATP_Ca_trans_C PF12424 Family 19 534 56.10 47 6.66 Changed Plasma membrane calcium transporter ATPase C terminal
ATP_sub_h PF10775 Family 18 131 69.20 44 51.92 Changed ATP synthase complex subunit h
ATP_synth_reg PF14960 Family 11 92 46.90 48 42.08 New ATP synthase regulation
ATP_synt_H PF05493 Family 34 346 64.60 36 75.96 Changed ATP synthase subunit H
ATP_synt_I PF03899 Family 154 2035 94.90 20 74.16 Changed ATP synthase I chain
ATP_transf PF09830 Family 64 315 64.90 31 19.94 Changed ATP adenylyltransferase
Atracotoxin PF05353 Family 5 7 42.10 65 76.62 Changed Delta Atracotoxin
Atrophin-1 PF03154 Family 4 230 495.60 34 60.53 Changed Atrophin-1 family
ATS PF15445 Domain 35 168 348.00 56 19.28 New acidic terminal segments, variant surface antigen of PfEMP1
ATS3 PF06232 Family 15 103 120.20 37 65.84 Changed Embryo-specific protein 3, (ATS3)
Attachment_P66 PF11263 Family 7 107 182.80 58 57.03 Changed Borrelia burgdorferi attachment protein P66
Attacin_C PF03769 Family 24 176 106.40 31 59.05 Changed Attacin, C-terminal region
Attacin_N PF03768 Family 17 105 66.10 44 30.45 Changed Attacin, N-terminal region
Attractin PF08037 Family 2 5 54.20 59 89.14 Changed Attractin family
Atu4866 PF11512 Family 14 114 77.40 61 65.27 Changed Agrobacterium tumefaciens protein Atu4866
Atx10homo_assoc PF09759 Domain 20 296 93.20 31 16.29 Changed Spinocerebellar ataxia type 10 protein domain
ATXN-1_C PF12547 Family 5 77 39.00 78 8.02 Changed Capicua transcriptional repressor modulator
ATX_III PF08098 Family 2 7 24.30 76 41.98 Changed Anemonia sulcata toxin III family
AT_hook PF02178 Motif 40 2152 12.60 52 7.35 Changed AT hook motif
Augurin PF15187 Family 9 52 112.90 68 82.25 New Oesophageal cancer-related gene 4
AurF PF11583 Family 33 580 282.80 21 88.21 Changed P-aminobenzoate N-oxygenase AurF
Aurora-A_bind PF09041 Domain 6 51 63.60 57 8.93 Changed Aurora-A binding
Autoind_bind PF03472 Domain 188 2219 144.40 20 58.87 Changed Autoinducer binding domain
Autoind_synth PF00765 Family 13 807 174.20 26 85.33 Changed Autoinducer synthetase
Autophagy_act_C PF03987 Domain 57 558 65.50 35 23.68 Changed Autophagocytosis associated protein, active-site domain
Autophagy_Cterm PF10381 Domain 20 317 24.90 65 7.80 Changed Autophagocytosis associated protein C-terminal
Autophagy_N PF03986 Domain 29 337 156.20 35 49.50 Changed Autophagocytosis associated protein (Atg3), N-terminal domain
Autotransporter PF03797 Domain 212 8209 238.90 16 26.88 Changed Autotransporter beta-domain
Autotrns_rpt PF12951 Repeat 713 7020 31.50 41 9.95 Changed Autotransporter-associated beta strand repeat
Auto_anti-p27 PF06677 Family 14 282 40.90 37 20.80 Changed Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
Auts2 PF15336 Family 17 176 197.20 53 25.25 New Autism susceptibility gene 2 protein
Auxin_BP PF02041 Family 4 80 144.30 65 86.11 Changed Auxin binding protein
Auxin_canalis PF05703 Family 11 176 205.20 37 58.36 Changed Auxin canalisation
Auxin_inducible PF02519 Family 112 1334 94.40 31 75.65 Changed Auxin responsive protein
Auxin_repressed PF05564 Family 21 211 110.90 35 91.34 Changed Dormancy/auxin associated protein
Auxin_resp PF06507 Family 32 687 77.80 45 10.75 Changed Auxin response factor
AUX_IAA PF02309 Family 56 1709 179.60 27 48.17 Changed AUX/IAA family
Avian_gp85 PF03708 Family 5 283 223.70 64 47.01 Changed Avian retrovirus envelope protein, gp85
Avidin PF01382 Domain 15 142 107.70 29 48.71 Changed Avidin family
AviRa PF11599 Family 2 11 242.50 39 98.23 Changed RRNA methyltransferase AviRa
Avirulence PF03377 Family 2 801 173.70 53 73.42 Changed Xanthomonas avirulence protein, Avr/PthA
Avl9 PF09794 Family 23 380 300.40 27 50.61 Changed Transport protein Avl9
AvrB_AvrC PF05394 Family 6 40 292.60 48 94.26 Changed Avirulence protein
AvrD PF05655 Family 3 71 260.20 35 96.63 Changed Pseudomonas avirulence D protein (AvrD)
AvrE PF11725 Family 9 200 959.80 27 91.93 Changed Pathogenicity factor
AvrL567-A PF11529 Family 3 13 126.90 81 84.57 Changed Melampsora lini avirulence protein AvrL567-A
AvrPphF-ORF-2 PF09143 Domain 4 50 156.10 48 71.89 Changed AvrPphF-ORF-2
AvrPto PF11592 Family 2 21 105.30 53 65.34 Changed Central core of the bacterial effector protein AvrPto
AvrPtoB-E3_ubiq PF09046 Domain 4 25 122.10 75 30.16 Changed AvrPtoB E3 ubiquitin ligase
AvrRpt-cleavage PF05627 Domain 22 371 36.90 43 27.04 Changed Cleavage site for pathogenic type III effector avirulence factor Avr
Av_adeno_fibre PF06536 Family 6 42 96.10 66 20.54 Changed Avian adenovirus fibre
AWPM-19 PF05512 Family 12 134 126.30 45 74.10 Changed AWPM-19-like family
AXE1 PF05448 Family 11 1046 275.50 29 81.06 Changed Acetyl xylan esterase (AXE1)
AXH PF08517 Family 10 201 116.40 43 20.73 Changed Ataxin-1 and HBP1 module (AXH)
Axin_b-cat_bind PF08833 Domain 9 177 40.50 58 5.22 Changed Axin beta-catenin binding domain
Ax_dynein_light PF10211 Family 30 362 174.70 30 36.75 Changed Axonemal dynein light chain
AzlC PF03591 Family 162 3558 141.30 28 60.12 Changed AzlC protein
AzlD PF05437 Family 189 3465 96.30 21 90.16 Changed Branched-chain amino acid transport protein (AzlD)
A_amylase_inhib PF01356 Domain 6 15 65.90 51 70.74 Changed Alpha amylase inhibitor
A_deamin PF02137 Family 59 781 308.00 27 55.17 Changed Adenosine-deaminase (editase) domain
A_deaminase PF00962 Domain 15 4245 319.30 23 76.53 Changed Adenosine/AMP deaminase
A_deaminase_N PF08451 Family 32 240 85.10 33 19.39 Changed Adenosine/AMP deaminase N-terminal
A_thal_3526 PF09713 Domain 15 206 53.00 50 20.53 Changed Plant protein 1589 of unknown function (A_thal_3526)
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