Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.

Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
ABC_tran PF00005 Domain 55 363409 147.80 27 41.67 Changed ABC transporter
COX1 PF00115 Family 94 254351 227.90 58 95.26 Changed Cytochrome C and Quinol oxidase polypeptide I
zf-H2C2_2 PF13465 Domain 163 227898 25.80 50 27.05 Changed Zinc-finger double domain
WD40 PF00400 Repeat 1804 193252 38.20 23 20.36 Changed WD domain, G-beta repeat
MFS_1 PF07690 Family 195 181668 295.20 13 82.52 Changed Major Facilitator Superfamily
RVT_1 PF00078 Family 152 172360 171.90 64 42.06 Changed Reverse transcriptase (RNA-dependent DNA polymerase)
BPD_transp_1 PF00528 Family 81 156339 195.90 15 65.39 Changed Binding-protein-dependent transport system inner membrane component
Response_reg PF00072 Domain 57 151337 111.60 26 30.95 Changed Response regulator receiver domain
GP120 PF00516 Family 24 146453 228.30 54 78.04 Changed Envelope glycoprotein GP120
HATPase_c PF02518 Domain 659 129386 113.50 24 18.95 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
RVP PF00077 Domain 50 124336 94.30 86 28.21 Changed Retroviral aspartyl protease
Pkinase PF00069 Domain 54 114309 237.60 20 40.43 Changed Protein kinase domain
Ank_2 PF12796 Family 620 110723 89.50 23 36.39 Changed Ankyrin repeats (3 copies)
Cytochrom_B_N_2 PF13631 Domain 68 102102 142.10 66 51.21 Changed Cytochrome b(N-terminal)/b6/petB
Oxidored_q1 PF00361 Family 33 91875 225.60 28 56.30 Changed NADH-Ubiquinone/plastoquinone (complex I), various chains
Helicase_C PF00271 Family 480 89228 81.30 23 8.77 Changed Helicase conserved C-terminal domain
HTH_1 PF00126 Domain 1536 86700 59.70 33 19.98 Changed Bacterial regulatory helix-turn-helix protein, lysR family
LysR_substrate PF03466 Family 415 85941 202.80 15 67.81 Changed LysR substrate binding domain
adh_short PF00106 Domain 230 80936 163.30 25 56.70 Changed short chain dehydrogenase
HisKA PF00512 Domain 265 79834 67.20 24 10.76 Changed His Kinase A (phospho-acceptor) domain
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z