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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
z-alpha PF02295 Domain 8 330 62.40 29 16.39 Changed Adenosine deaminase z-alpha domain
Z1 PF10593 Domain 35 212 234.80 28 28.00 Changed Z1 domain
ZapA PF05164 Family 162 2881 96.40 23 86.52 Changed Cell division protein ZapA
Zds_C PF08632 Domain 11 139 52.40 63 5.56 Changed Activator of mitotic machinery Cdc14 phosphatase activation C-term
Zea_mays_MuDR PF05928 Family 4 19 203.00 85 94.63 Changed Zea mays MURB-like protein (MuDR)
Zein PF01559 Family 9 325 134.90 41 97.79 Changed Zein seed storage protein
Zein-binding PF04576 Family 26 261 91.70 43 16.67 Changed Zein-binding
Zeta_toxin PF06414 Family 40 1247 168.70 21 56.57 Changed Zeta toxin
zf-3CxxC PF13695 Domain 45 436 92.60 29 37.05 Changed Zinc-binding domain
zf-4CXXC_R1 PF10497 Domain 13 365 98.80 40 16.64 Changed Zinc-finger domain of monoamine-oxidase A repressor R1
zf-A20 PF01754 Family 53 982 25.10 43 10.59 Changed A20-like zinc finger
zf-AD PF07776 Domain 98 2455 74.80 20 13.71 Changed Zinc-finger associated domain (zf-AD)
zf-AN1 PF01428 Family 181 1823 42.70 34 20.23 Changed AN1-like Zinc finger
zf-Apc11 PF12861 Family 5 247 81.50 49 56.19 Changed Anaphase-promoting complex subunit 11 RING-H2 finger
zf-BED PF02892 Domain 41 1403 47.30 26 9.97 Changed BED zinc finger
zf-B_box PF00643 Domain 106 7772 43.10 26 9.16 Changed B-box zinc finger
zf-C2H2 PF00096 Domain 194 44392 23.40 34 6.87 Changed Zinc finger, C2H2 type
zf-C2H2_2 PF12756 Family 112 2196 77.00 18 19.96 Changed C2H2 type zinc-finger (2 copies)
zf-C2H2_3 PF13878 Domain 43 338 40.40 39 8.27 Changed zinc-finger of acetyl-transferase ESCO
zf-C2H2_4 PF13894 Domain 594 26727 24.50 26 7.18 Changed C2H2-type zinc finger
zf-C2H2_6 PF13912 Domain 81 8615 24.80 27 6.24 Changed C2H2-type zinc finger
zf-C2H2_7 PF15269 Domain 2 69 54.00 86 8.43 New Zinc-finger
zf-C2H2_jaz PF12171 Family 140 2095 26.70 31 6.11 Changed Zinc-finger double-stranded RNA-binding
zf-C2HC PF01530 Family 33 1621 30.90 62 11.87 Changed Zinc finger, C2HC type
zf-C2HC5 PF06221 Domain 33 300 53.90 44 10.63 Changed Putative zinc finger motif, C2HC5-type
zf-C2HC_2 PF13913 Domain 111 1078 24.70 37 10.97 Changed zinc-finger of a C2HC-type
zf-C3H1 PF10650 Domain 14 159 22.10 48 1.64 Changed Putative zinc-finger domain
zf-C3HC PF07967 Domain 28 278 127.90 26 24.50 Changed C3HC zinc finger-like
zf-C3Hc3H PF13891 Domain 48 422 65.20 32 16.65 Changed Potential DNA-binding domain
zf-C3HC4 PF00097 Domain 35 9094 40.40 44 7.09 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 Domain 345 3897 41.60 35 7.80 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_3 PF13920 Domain 585 5985 49.20 31 9.50 Changed Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_4 PF15227 Domain 13 3078 42.10 42 9.14 New zinc finger of C3HC4-type, RING
zf-C4 PF00105 Domain 26 7638 66.30 47 14.76 Changed Zinc finger, C4 type (two domains)
zf-C4H2 PF10146 Family 7 142 206.40 47 91.22 Changed Zinc finger-containing protein
zf-C4pol PF14260 Domain 123 623 74.40 35 5.48 Changed C4-type zinc-finger of DNA polymerase delta
zf-C4_ClpX PF06689 Domain 130 4410 40.10 59 9.68 Changed ClpX C4-type zinc finger
zf-C4_Topoisom PF01396 Family 27 10157 39.50 35 11.65 Changed Topoisomerase DNA binding C4 zinc finger
zf-C5HC2 PF02928 Domain 52 591 54.70 37 4.03 Changed C5HC2 zinc finger
zf-CCCH PF00642 Family 88 7686 26.00 35 7.49 Changed Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_2 PF14608 Domain 44 1117 18.40 40 10.59 New Zinc finger C-x8-C-x5-C-x3-H type
zf-CCHC PF00098 Domain 184 50986 17.90 58 7.29 Changed Zinc knuckle
zf-CCHC_2 PF13696 Domain 5 190 31.30 45 8.63 Changed Zinc knuckle
zf-CCHC_3 PF13917 Domain 25 384 40.60 31 17.55 Changed Zinc knuckle
zf-CCHC_4 PF14392 Domain 79 629 38.20 30 8.98 Changed Zinc knuckle
zf-CCHC_5 PF14787 Domain 12 108 33.90 51 5.38 New GAG-polyprotein viral zinc-finger
zf-CCHC_6 PF15288 Domain 25 289 37.10 43 3.39 New Zinc knuckle
zf-CCHH PF10283 Domain 22 261 25.50 48 7.07 Changed Zinc-finger (CX5CX6HX5H) motif
zf-CDGSH PF09360 Domain 158 1359 42.40 34 41.39 Changed Iron-binding zinc finger CDGSH type
zf-CGNR PF11706 Domain 80 961 43.60 41 22.67 Changed CGNR zinc finger
zf-CHC2 PF01807 Domain 19 5345 96.10 38 16.85 Changed CHC2 zinc finger
zf-CHCC PF10276 Domain 37 906 40.00 35 42.20 Changed Zinc-finger domain
zf-CHY PF05495 Domain 76 971 75.40 32 23.00 Changed CHY zinc finger
zf-CpG_bind_C PF12269 Domain 6 134 213.60 55 40.04 Changed CpG binding protein zinc finger C terminal domain
zf-CSL PF05207 Domain 63 560 58.50 38 39.82 Changed CSL zinc finger
zf-CW PF07496 Domain 52 682 48.90 35 6.09 Changed CW-type Zinc Finger
zf-CXXC PF02008 Domain 31 1021 46.30 45 4.85 Changed CXXC zinc finger domain
zf-DBF PF07535 Domain 29 271 47.60 39 6.36 Changed DBF zinc finger
zf-DHHC PF01529 Family 97 4432 169.10 23 40.72 Changed DHHC palmitoyltransferase
zf-Di19 PF05605 Domain 56 760 57.80 32 13.39 Changed Drought induced 19 protein (Di19), zinc-binding
zf-DNA_Pol PF08996 Domain 40 326 179.70 29 13.00 Changed DNA Polymerase alpha zinc finger
zf-DNL PF05180 Domain 36 372 65.70 43 36.22 Changed DNL zinc finger
zf-Dof PF02701 Family 12 858 61.10 65 20.51 Changed Dof domain, zinc finger
zf-dskA_traR PF01258 Family 241 5127 36.80 38 28.18 Changed Prokaryotic dksA/traR C4-type zinc finger
zf-FCS PF06467 Domain 56 1780 41.30 25 16.45 Changed MYM-type Zinc finger with FCS sequence motif
zf-FPG_IleRS PF06827 Domain 143 6847 29.50 34 5.63 Changed Zinc finger found in FPG and IleRS
zf-GRF PF06839 Domain 14 1335 45.30 32 10.05 Changed GRF zinc finger
zf-H2C2 PF09337 Domain 11 664 39.20 51 10.82 Changed His(2)-Cys(2) zinc finger
zf-H2C2_2 PF13465 Domain 163 227898 25.80 50 27.05 Changed Zinc-finger double domain
zf-H2C2_5 PF13909 Domain 73 3546 24.70 29 7.43 Changed C2H2-type zinc-finger domain
zf-HC2 PF13490 Domain 461 2372 34.60 27 15.34 Changed Putative zinc-finger
zf-HC5HC2H PF13771 Domain 144 1247 83.60 31 6.32 Changed PHD-like zinc-binding domain
zf-HC5HC2H_2 PF13832 Domain 34 1557 113.10 38 10.90 Changed PHD-zinc-finger like domain
ZF-HD_dimer PF04770 Family 36 349 58.20 56 24.97 Changed ZF-HD protein dimerisation region
zf-His_Me_endon PF05551 Domain 11 70 122.00 30 40.93 Changed Zinc-binding loop region of homing endonuclease
zf-HIT PF04438 Domain 100 1073 30.60 38 9.10 Changed HIT zinc finger
zf-HYPF PF07503 Domain 185 2924 34.90 45 9.25 Changed HypF finger
zf-IS66 PF13005 Domain 190 3219 45.40 39 10.71 Changed zinc-finger binding domain of transposase IS66
zf-ISL3 PF14690 Domain 135 4025 47.00 38 15.25 New zinc-finger of transposase IS204/IS1001/IS1096/IS1165
zf-like PF04071 Family 24 168 85.40 33 50.46 Changed Cysteine-rich small domain
zf-LITAF-like PF10601 Family 46 755 70.80 27 40.68 Changed LITAF-like zinc ribbon domain
zf-LSD1 PF06943 Domain 23 365 25.00 54 21.25 Changed LSD1 zinc finger
zf-LYAR PF08790 Domain 30 311 27.80 55 8.36 Changed LYAR-type C2HC zinc finger
zf-met PF12874 Domain 388 5348 24.20 29 5.85 Changed Zinc-finger of C2H2 type
zf-met2 PF12907 Family 13 251 36.30 39 40.41 Changed Zinc-binding
zf-MIZ PF02891 Domain 36 975 50.20 45 7.21 Changed MIZ/SP-RING zinc finger
zf-Mss51 PF13824 Domain 25 148 63.70 44 12.10 Changed Zinc-finger of mitochondrial splicing suppressor 51
zf-MYND PF01753 Family 177 3934 41.10 35 7.26 Changed MYND finger
zf-NADH-PPase PF09297 Domain 63 1999 31.80 34 10.88 Changed NADH pyrophosphatase zinc ribbon domain
zf-nanos PF05741 Family 36 305 55.30 54 25.74 Changed Nanos RNA binding domain
zf-NF-X1 PF01422 Family 21 469 21.40 56 4.43 Changed NF-X1 type zinc finger
zf-NPL4 PF05020 Family 22 277 135.90 48 23.39 Changed NPL4 family, putative zinc binding region
zf-Nse PF11789 Domain 22 399 59.30 29 18.81 Changed Zinc-finger of the MIZ type in Nse subunit
zf-P11 PF03854 Family 3 115 49.90 61 52.85 Changed P-11 zinc finger
zf-Paramyx-P PF13008 Domain 26 152 46.90 50 16.38 Changed Zinc-binding domain of Paramyxoviridae V protein
zf-PARP PF00645 Domain 54 620 80.80 30 14.72 Changed Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
zf-PHD-like PF15446 Domain 28 70 166.90 44 10.80 New PHD/FYVE-zinc-finger like domain
zf-piccolo PF05715 Domain 12 212 59.80 62 3.12 Changed Piccolo Zn-finger
zf-primase PF09329 Domain 37 283 46.00 37 6.37 Changed Primase zinc finger
zf-RAG1 PF10426 Domain 53 4732 29.20 66 5.20 Changed Recombination-activating protein 1 zinc-finger domain
zf-RanBP PF00641 Domain 24 3729 29.60 34 7.44 Changed Zn-finger in Ran binding protein and others
zf-rbx1 PF12678 Family 110 903 76.70 40 28.82 Changed RING-H2 zinc finger
zf-ribbon_3 PF13248 Domain 487 1966 25.60 36 8.81 Changed zinc-ribbon domain
zf-RING-like PF08746 Domain 12 210 43.10 37 14.10 Changed RING-like domain
zf-RING_2 PF13639 Domain 329 15070 45.90 34 10.07 Changed Ring finger domain
zf-RING_3 PF14369 Domain 96 381 33.60 39 9.85 Changed zinc-finger
zf-RING_4 PF14570 Domain 58 462 47.80 51 5.58 New RING/Ubox like zinc-binding domain
zf-RING_5 PF14634 Domain 118 801 47.50 29 12.65 New zinc-RING finger domain
zf-RING_6 PF14835 Domain 5 67 62.10 57 9.95 New zf-RING of BARD1-type protein
zf-RING_UBOX PF13445 Domain 80 584 41.40 40 9.31 Changed RING-type zinc-finger
zf-RNPHF PF08080 Domain 3 163 33.70 76 8.58 Changed RNPHF zinc finger
zf-RVT PF13966 Domain 117 1664 79.10 24 12.48 Changed zinc-binding in reverse transcriptase
zf-SAP30 PF13866 Domain 5 123 71.50 65 39.79 Changed SAP30 zinc-finger
zf-Sec23_Sec24 PF04810 Domain 133 1393 40.00 38 4.58 Changed Sec23/Sec24 zinc finger
zf-SNAP50_C PF12251 Family 20 210 183.30 30 46.58 Changed snRNA-activating protein of 50kDa MW C terminal
zf-TAZ PF02135 Family 22 729 76.50 38 8.52 Changed TAZ zinc finger
zf-tcix PF14952 Domain 12 74 43.10 65 7.99 New Putative treble-clef, zinc-finger, Zn-binding
zf-TFIIB PF13453 Domain 126 674 41.10 44 38.76 Changed Transcription factor zinc-finger
zf-TFIIIC PF12660 Domain 16 171 90.00 25 12.66 Changed Putative zinc-finger of transcription factor IIIC complex
zf-Tim10_DDP PF02953 Domain 113 1455 64.70 25 64.21 Changed Tim10/DDP family zinc finger
zf-TRAF PF02176 Family 10 1745 55.90 26 18.63 Changed TRAF-type zinc finger
zf-trcl PF13451 Domain 91 388 49.10 57 50.87 Changed Probable zinc-binding domain
zf-TRM13_CCCH PF11722 Domain 27 181 30.90 40 6.89 Changed CCCH zinc finger in TRM13 protein
zf-U1 PF06220 Domain 11 661 36.70 41 15.13 Changed U1 zinc finger
zf-U11-48K PF05253 Domain 84 695 26.70 35 12.17 Changed U11-48K-like CHHC zinc finger
zf-UBP PF02148 Domain 179 2273 68.20 29 11.39 Changed Zn-finger in ubiquitin-hydrolases and other protein
zf-UBR PF02207 Family 99 1193 71.30 30 4.46 Changed Putative zinc finger in N-recognin (UBR box)
zf-UDP PF14569 Domain 6 380 75.90 53 8.56 New Zinc-binding RING-finger
zf-XS PF03470 Domain 12 126 41.60 45 7.07 Changed XS zinc finger domain
zf-ZPR1 PF03367 Family 14 842 154.90 34 67.74 Changed ZPR1 zinc-finger domain
Zfx_Zfy_act PF04704 Family 5 252 215.60 54 43.94 Changed Zfx / Zfy transcription activation region
zinc-ribbons_6 PF07191 Family 20 619 69.30 60 95.42 Changed zinc-ribbons
zinc_ribbon_2 PF13240 Domain 442 1062 23.00 39 6.97 Changed zinc-ribbon domain
zinc_ribbon_4 PF13717 Domain 74 110 35.80 31 8.64 Changed zinc-ribbon domain
zinc_ribbon_5 PF13719 Domain 79 534 36.50 35 10.00 Changed zinc-ribbon domain
zinc_ribbon_6 PF14599 Domain 75 401 59.80 44 12.44 New Zinc-ribbon
Zip PF02535 Family 40 6416 223.60 18 74.42 Changed ZIP Zinc transporter
ZipA_C PF04354 Domain 59 1250 128.60 41 38.95 Changed ZipA, C-terminal FtsZ-binding domain
Zn-ribbon_8 PF09723 Domain 182 1432 41.50 36 43.22 Changed Zinc ribbon domain
Zn_clus PF00172 Domain 29 13354 39.10 32 5.66 Changed Fungal Zn(2)-Cys(6) binuclear cluster domain
Zn_dep_PLPC PF00882 Domain 152 1056 178.70 16 56.63 Changed Zinc dependent phospholipase C
Zn_peptidase PF04228 Family 8 1671 272.60 44 93.05 Changed Putative neutral zinc metallopeptidase
Zn_peptidase_2 PF04298 Family 75 1143 219.40 45 96.58 Changed Putative neutral zinc metallopeptidase
Zn_protease PF05618 Family 11 1019 135.10 33 62.74 Changed Putative ATP-dependant zinc protease
Zn_ribbon_2 PF12674 Domain 52 343 80.40 35 52.03 Changed Putative zinc ribbon domain
Zn_ribbon_recom PF13408 Domain 726 3758 62.10 23 12.28 Changed Recombinase zinc beta ribbon domain
Zn_Tnp_IS1 PF03811 Domain 4 1346 33.10 58 28.45 Changed InsA N-terminal domain
Zn_Tnp_IS1595 PF12760 Domain 73 764 47.70 34 15.88 Changed Transposase zinc-ribbon domain
Zn_Tnp_IS91 PF14319 Family 72 995 105.20 32 30.65 Changed Transposase zinc-binding domain
Zona_pellucida PF00100 Family 143 2880 221.40 16 41.22 Changed Zona pellucida-like domain
Zot PF05707 Family 17 575 183.60 20 52.20 Changed Zonular occludens toxin (Zot)
ZU5 PF00791 Family 30 1349 99.30 30 7.68 Changed ZU5 domain
Zw10 PF06248 Family 12 279 435.20 19 61.30 Changed Centromere/kinetochore Zw10
Zwint PF15556 Family 8 45 188.50 66 88.54 New ZW10 interactor
ZYG-11_interact PF05884 Family 6 31 260.50 29 89.67 Changed Interactor of ZYG-11
ZZ PF00569 Domain 10 2746 44.50 31 4.44 Changed Zinc finger, ZZ type
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z