HMMER3/b [3.0b2 | June 2009] NAME zf-CCCH ACC PF00642.17 DESC Zinc finger C-x8-C-x5-C-x3-H type (and similar) LENG 27 ALPH amino RF no CS yes MAP yes DATE Tue Sep 8 13:43:20 2009 NSEQ 94 EFFN 94.000000 CKSUM 121922196 GA 20.50 20.50; TC 20.50 20.50; NC 20.40 20.40; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 9421015 -E 1000 HMM pfamseq STATS LOCAL MSV -7.4043 0.72170 STATS LOCAL VITERBI -7.3920 0.72170 STATS LOCAL FORWARD -4.2035 0.72170 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.93030 2.16024 3.38531 3.01265 2.61634 2.43229 2.84669 3.92551 2.60965 3.19004 4.25811 3.45199 3.16089 3.27420 2.60371 2.94392 2.98222 3.71148 4.94531 2.81464 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.00000 * 1 5.19030 7.69188 2.81196 2.93407 2.35950 3.82370 6.15294 4.70772 2.55827 3.55787 4.69906 4.30697 2.13057 2.84057 3.79888 2.94833 3.93020 6.08047 2.94138 1.21060 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 2 3.40224 7.70302 2.73679 3.03394 3.04179 2.01931 6.14925 6.53647 0.85714 6.00890 6.74332 3.70651 4.16025 3.29266 2.58453 3.29589 3.67701 6.09442 8.13487 3.74561 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 3 3.97637 7.68990 4.31903 2.51504 3.90374 3.88240 3.79641 4.25661 3.04666 3.65075 3.56637 4.30504 3.43698 3.09881 1.99332 3.39890 1.12742 2.76187 8.12543 2.81797 3 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 4 2.05285 7.70224 3.11024 1.51151 4.60032 4.40955 6.14944 4.34875 2.72223 4.11499 6.74263 3.87868 2.19548 3.47824 2.20032 2.68723 3.26514 2.26198 8.13429 6.72270 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 5 2.93198 7.59422 3.00435 2.51680 6.89285 5.99587 6.18852 2.43014 3.61367 1.04399 4.45675 3.10574 2.23887 4.22960 2.85887 4.12928 3.50140 2.99051 8.05574 4.45291 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 6 9.52607 0.00109 9.53502 9.62811 10.16784 8.58126 10.13902 10.60614 9.81779 9.63041 11.00211 9.96037 9.21815 10.13154 9.55021 9.94486 9.92719 10.23547 10.42553 10.41874 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 7 3.87203 3.34297 2.46056 3.10842 7.04903 2.95059 3.48808 3.39970 1.86377 4.46250 3.43654 2.96534 2.83530 2.79723 1.69152 2.56395 3.23652 4.66692 8.13461 4.10924 7 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.03951 8.13486 3.25847 0.61958 0.77255 0.48576 0.95510 8 3.04312 7.66565 2.72137 2.96285 1.87882 5.92569 2.84371 6.49863 2.82781 4.20569 6.70601 2.33599 4.66479 3.81470 2.28605 2.89764 2.17293 3.69671 8.09765 2.12023 8 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00045 8.09580 8.81815 0.61958 0.77255 0.11708 2.20290 9 8.38159 9.12447 8.99878 9.06991 0.88158 8.66086 2.70486 7.88571 8.82372 3.08800 8.36003 8.10980 8.88833 3.29514 8.52223 8.08561 8.55027 3.84941 2.24833 1.18148 9 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 10 1.90185 7.68567 4.00728 2.99642 3.19516 5.96731 2.86667 4.75982 2.79878 2.20555 2.12231 3.27240 6.36062 2.36197 2.92615 2.04876 3.89799 4.45976 8.12239 3.38805 10 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 11 2.46073 7.69939 4.33848 1.75656 7.04412 5.96351 6.15057 4.02480 1.64111 3.55329 3.60962 3.96874 6.35697 2.30230 1.39345 5.15207 2.86289 3.80261 8.13226 6.72155 11 - G 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.07833 8.13486 2.58961 0.61958 0.77255 0.48576 0.95510 12 2.69690 7.61610 3.93363 3.45487 2.88230 2.13653 3.81877 3.07331 4.05061 3.50602 3.43090 3.07046 4.22114 3.87965 3.16747 2.29252 1.23710 6.00404 8.05181 3.19468 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00047 8.05700 8.77935 0.61958 0.77255 0.06798 2.72239 13 4.26080 8.16343 6.16210 5.52653 7.57699 0.28584 3.78049 3.81281 2.98568 4.32168 7.21870 3.97195 6.89906 3.93645 2.95395 3.81850 6.01065 6.59764 8.49704 7.21756 13 - - 2.68788 4.42395 2.77689 2.73293 3.46523 2.40362 3.72664 3.29524 2.67422 2.69028 4.24859 2.90138 2.73909 3.18316 2.89539 2.38056 2.77225 2.98688 4.58646 3.61673 0.12041 2.17771 8.85721 0.46233 0.99375 0.48576 0.95510 14 2.52747 7.68283 3.20675 2.49331 2.53276 3.65161 3.47339 2.80736 3.20906 3.26701 4.61056 3.42479 3.80054 3.08118 3.00291 2.66596 1.99254 3.44772 4.41085 2.19803 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 15 9.52607 0.00109 9.53502 9.62811 10.16784 8.58126 10.13902 10.60614 9.81779 9.63041 11.00211 9.96037 9.21815 10.13154 9.55021 9.94486 9.92719 10.23547 10.42553 10.41874 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 16 3.09726 7.70197 4.07658 4.88131 7.04798 3.70508 3.77195 3.88562 1.52728 4.45059 6.74239 3.06180 1.48703 2.67435 2.24292 2.13507 3.24843 4.53733 4.27479 6.72258 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 17 4.20763 8.03808 3.85560 6.20755 1.50676 6.99453 2.99880 6.64366 4.08880 3.28112 7.14713 3.52446 7.36082 6.33277 1.75254 6.29448 6.41785 6.40892 7.66872 0.86278 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01673 8.13486 4.11690 0.61958 0.77255 0.48576 0.95510 18 4.00316 7.98136 6.86002 4.16111 8.80199 0.13921 8.35287 8.34908 7.61104 7.97564 8.73745 4.37144 7.47331 7.66463 4.52496 3.19416 6.58016 3.64875 10.08658 8.92553 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.11858 8.84092 0.61958 0.77255 0.20823 1.67143 19 1.83404 7.69448 1.74101 2.27329 7.03686 2.46895 6.15231 4.00623 3.26464 2.95361 6.73586 2.84802 2.69199 5.24951 5.38043 2.02528 3.01218 3.08293 8.12879 6.71945 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 20 2.51297 4.58236 3.09098 2.96958 3.29304 5.96238 4.56751 6.53580 2.25916 3.86937 6.74296 2.70061 6.35588 2.17986 1.35122 2.31399 2.69732 4.67631 8.13457 4.06401 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 21 9.52607 0.00109 9.53502 9.62811 10.16784 8.58126 10.13902 10.60614 9.81779 9.63041 11.00211 9.96037 9.21815 10.13154 9.55021 9.94486 9.92719 10.23547 10.42553 10.41874 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 22 3.67367 3.66060 4.39719 2.84260 7.04937 5.96230 2.57214 6.53632 1.58574 3.28862 6.74321 2.25520 3.00094 2.40946 1.88528 2.51869 2.95005 3.76671 8.13477 6.72299 24 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 23 7.74202 3.88973 8.38451 3.80252 0.28519 8.19384 7.14383 7.68914 7.07305 6.86320 8.16914 7.77200 8.51857 4.33339 2.90701 4.18767 7.93450 7.58511 7.33366 2.15488 25 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 24 1.06499 7.01544 3.15052 5.64589 6.14966 6.29673 2.77610 2.12149 3.05049 2.53474 2.92618 2.81430 6.67557 3.72551 5.94505 2.55671 5.54228 2.97383 7.59941 3.87918 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 25 9.69890 10.03594 9.51926 9.61144 9.98537 8.60805 0.00108 10.61574 9.80766 9.61861 11.01180 9.97525 9.23639 10.12462 9.54700 10.14743 10.05926 10.29705 10.37815 10.16374 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 26 3.73126 3.38441 2.81955 3.89052 6.96010 1.39275 4.01956 4.08378 3.45656 3.10440 4.27833 3.23288 1.71976 5.27623 3.99098 1.86871 4.14313 2.60658 8.09045 6.69607 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00044 8.13486 8.85721 0.61958 0.77255 0.48576 0.95510 27 3.96451 7.68228 2.94394 2.16067 2.95764 5.96831 4.57036 3.45240 2.30250 2.32792 3.37263 4.41547 2.19657 2.20857 2.45862 3.64532 2.88641 2.80527 8.11995 3.77376 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00029 8.13472 * 0.61958 0.77255 0.00000 * //