HMMER3/b [3.0b2 | June 2009] NAME TSP_3 ACC PF02412.11 DESC Thrombospondin type 3 repeat LENG 16 ALPH amino RF no CS no MAP yes DATE Wed Sep 16 14:32:49 2009 NSEQ 31 EFFN 31.000000 CKSUM 1903323625 GA 26.70 3.60; TC 26.80 3.90; NC 26.60 3.50; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 9421015 -E 1000 HMM pfamseq STATS LOCAL MSV -6.0909 0.73922 STATS LOCAL VITERBI -6.6047 0.73922 STATS LOCAL FORWARD -3.2474 0.73922 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.96219 2.73666 1.22975 3.24943 4.34436 2.43394 4.73954 3.40533 3.04566 3.07623 4.19962 2.59124 3.28627 3.49403 3.72168 3.13270 3.36650 2.99896 7.19463 5.21272 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.00000 * 1 2.48461 6.71575 2.69277 2.35684 6.06029 2.89177 5.16743 2.87186 1.61773 2.27847 5.75655 2.85604 5.37378 2.75306 4.39504 2.77683 2.38893 3.41764 7.14875 5.73811 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 2 6.19507 8.72766 0.09207 4.98863 8.20775 6.06561 6.89114 8.01316 6.26125 7.37090 8.41247 2.76278 6.80918 6.12422 7.07039 5.99676 6.56429 7.47059 9.22691 7.78490 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 3 2.12742 5.93534 3.59953 4.84345 2.53049 5.35784 5.63074 3.32467 4.77513 3.20711 3.41801 3.41572 5.73324 3.36923 2.56027 1.51989 1.73552 2.67755 6.53155 3.71384 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 4 5.85568 8.82858 0.23284 3.03622 8.00859 5.73537 6.48597 7.68086 3.02581 7.06268 8.07651 2.42811 6.48359 5.69192 6.70295 5.61184 6.20522 7.15233 9.21558 7.46053 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 5 2.77469 6.71767 3.26354 2.33920 6.06309 1.50098 5.16685 5.54932 2.16057 3.55217 3.77098 1.51812 5.37331 4.26308 3.32214 3.26867 2.96628 3.42618 7.15014 5.73897 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 6 6.16538 8.73096 0.15261 4.95062 8.19150 6.03787 6.85713 7.98582 6.22607 7.34617 8.38505 2.15524 6.78217 6.08756 7.04257 5.96333 6.53334 7.44359 9.22632 7.75820 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 7 2.71857 6.60466 5.22267 4.71690 6.20469 0.53233 5.85667 5.62174 3.25511 2.28522 6.05255 5.14172 5.84636 2.85061 5.04563 3.24107 2.81646 5.22761 7.47115 6.18116 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 8 4.40161 5.77379 6.37047 3.36015 2.86415 5.57474 2.52463 1.31648 5.53928 3.05182 3.34680 5.73833 5.93680 5.67061 2.61264 4.88694 4.63389 1.06174 6.40051 5.22486 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 9 4.21013 6.69487 3.41603 3.17421 6.02930 0.98318 5.17579 3.47771 3.09116 2.91818 3.50007 4.45932 1.60842 2.86730 3.38879 3.16788 4.44126 5.07980 7.13387 5.72962 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.63728 7.04329 0.75417 0.61958 0.77255 0.48576 0.95510 10 5.14873 7.89075 0.56633 3.98774 7.35453 5.11307 5.91200 7.02930 5.25896 6.43355 7.42274 1.20282 5.86792 5.12118 6.10922 2.63303 5.52782 6.45341 8.57314 6.85786 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00245 6.40846 7.13081 0.61958 0.77255 2.90394 0.05637 11 2.67251 6.17411 2.12843 2.55701 5.50296 4.48276 4.67157 3.01140 2.66275 2.38916 5.21905 2.43613 4.87584 3.77333 1.90532 2.78582 2.75052 2.89081 6.61662 3.16710 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00245 6.40846 7.13081 0.61958 0.77255 2.90394 0.05637 12 2.30289 5.94595 2.79082 3.55384 5.18998 4.55065 4.75327 4.61034 2.82604 1.53841 2.35518 2.77150 4.94084 2.06209 4.01445 2.68316 3.95532 2.36700 6.44440 5.10428 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00245 6.40846 7.13081 0.61958 0.77255 0.03488 3.37328 13 8.11724 8.90503 0.00452 7.49338 8.97281 7.33327 8.69098 9.33981 8.25856 8.41542 9.73904 8.00678 7.98589 8.37080 8.29682 8.27281 8.49276 8.95381 9.30800 9.10834 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 14 1.44424 5.78776 6.05964 3.44605 3.36028 5.50255 5.82081 3.02457 5.30148 2.15610 3.47454 1.40305 5.86912 3.43803 5.40417 3.33589 3.26100 2.13335 6.40478 5.22156 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 15 7.09455 0.06839 8.16239 8.11253 8.69567 7.08822 8.60142 8.81611 2.81653 8.09905 9.22819 8.12881 7.79108 8.25146 7.57966 7.34241 7.60922 8.19012 9.21206 8.85288 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00130 7.04329 7.76564 0.61958 0.77255 0.48576 0.95510 16 2.87303 6.78236 1.79583 2.12972 6.12719 5.01742 5.21905 5.61564 2.37861 5.08765 5.82468 4.48325 1.16652 2.47356 4.45809 2.62919 4.49698 3.43714 7.21415 5.79886 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00087 7.04287 * 0.61958 0.77255 0.00000 * //