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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: NANH_VIBC3 (A5F7A4)

Summary

This is the summary of UniProt entry NANH_VIBC3 (A5F7A4).

Description: Sialidase EC=3.2.1.18
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) (NCBI taxonomy ID 345073)
View Pfam proteome data.
Length: 781 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 24
disorder n/a 40 45
disorder n/a 48 54
Pfam A Sial-lect-inser 64 221
disorder n/a 188 192
disorder n/a 252 260
disorder n/a 289 291
disorder n/a 317 319
Pfam A Sial-lect-inser 347 543
Pfam A BNR_2 425 753
disorder n/a 538 542
disorder n/a 550 557
disorder n/a 699 703

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A5F7A4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MRFKNVKKTA LMLAMFGMAT SSNAALFDYN ATGDTEFDSP AKQGWMQDNT
50
51
NNGSGVLTNA DGMPAWLVQG IGGRAQWTYS LSTNQHAQAS SFGWRMTTEM
100
101
KVLSGGMITN YYANGTQRVL PIISLDSSGN LVVEFEGQTG RTVLATGTAA
150
151
TEYHKFELVF LPGSNPSASF YFDGKLIRDN IQPTASKQNM IVWGNGSSNT
200
201
DGVAAYRDIK FEIQGDVIFR GPDRIPSIVA SSVTPGVVTA FAEKRVGGGD
250
251
PGALSNTNDI ITRTSRDGGI TWDTELNLTE QINVSDEFDF SDPRPIYDPS
300
301
SNTVLVSYAR WPTDAAQNGD RIKPWMPNGI FYSVYDVASG NWQAPIDVTD
350
351
QVKERSFQIA GWGGSELYRR NTSLNSQQDW QSNAKIRIVD GAANQIQVAD
400
401
GSRKYVVTLS IDESGGLVAN LNGVSAPIIL QSEHAKVHSF HDYELQYSAL
450
451
NHTTTLFVDG QQITTWAGEV SQENNIQFGN ADAQIDGRLH VQKIVLTQQG
500
501
HNLVEFDAFY LAQQTPEVEK DLEKLGWTKI KTGNTMSLYG NASVNPGPGH
550
551
GITLTRQQNI SGSQNGRLIY PAIVLDRFFL NVMSIYSDDG GSNWQTGSTL
600
601
PIPFRWKSSS ILETLEPSEA DMVELQNGDL LLTARLDFNQ IVNGVNYSPR
650
651
QQFLSKDGGI TWSLLEANNA NVFSNISTGT VDASITRFEQ SDGSHFLLFT
700
701
NPQGNPAGTN GRQNLGLWFS FDEGVTWKGP IQLVNGASAY SDIYQLDSEN
750
751
AIVIVETDNS NMRILRMPIT LLKQKLTLSQ N                    
781
 

Show the unformatted sequence.

Checksums:
CRC64:FA85ED907FB20AF0
MD5:26d4d136c699b1d86d62900078190592

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
BNR_2 425 - 753 1W0O A 425 - 753 Jmol AstexViewer SPICE
1W0P A 425 - 753 Jmol AstexViewer SPICE
Sial-lect-inser 347 - 543 1W0O A 347 - 543 Jmol AstexViewer SPICE
1W0P A 347 - 543 Jmol AstexViewer SPICE
64 - 221 1W0O A 64 - 221 Jmol AstexViewer SPICE
1W0P A 64 - 221 Jmol AstexViewer SPICE