Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: C5CQ16_VARPS (C5CQ16)

Summary

This is the summary of UniProt entry C5CQ16_VARPS (C5CQ16).

Description: Glycoside hydrolase family 3 domain protein
Source organism: Variovorax paradoxus (strain S110) (NCBI taxonomy ID 543728)
View Pfam proteome data.
Length: 759 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 31
disorder n/a 31 32
Pfam A Glyco_hydro_3 49 365
disorder n/a 61 82
low_complexity n/a 144 161
disorder n/a 382 384
disorder n/a 389 393
Pfam A Glyco_hydro_3_C 405 642
low_complexity n/a 477 499
disorder n/a 509 517
disorder n/a 661 663
disorder n/a 668 669
Pfam A Fn3-like 677 746

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession C5CQ16. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MHVRIPAMAA ALLGLASVLF SPASLPAPAT AEGAKGADAR IESLIARMTV
50
51
EEKVGQLSLY GPANTNIPGN PQAGQRNAQQ EIDDVRAGRV TGLFNNEGLE
100
101
RKRVLQEVAV RESRLGIPLL YGADVIHGFR TIFPMPLAEA ASWEPELAER
150
151
TARAAAVEAS ADGFRWTFAP MVDIARDARW GRGIEGAGED VYLANQFAAA
200
201
RVRGFQGADL SRADSLLATP KHFAAYGAAE GGLDYAATDI SERTLRQVYL
250
251
PPFRAALDAG ALSVMSAFNE ISGIPSIANP ALLTGVLRDE WKFKGFVVSD
300
301
YTADEELIAH GYAADGREAA KQSFLAGTDV SMQSGLYMRH LPELVASGEV
350
351
PMARLDDAVR RVLWVKQKLG LFDQPLRGLD AAPAQPRADN PAHIALARED
400
401
ARRSIVLLKN ERAVLPLPKA GRKIALIGPF ASGTQDLLGA WSLFPGQAAP
450
451
VGIDDGLRAA LADPGALAVV RGSGIDAPLA GGIEAAVAAA READVVVLAI
500
501
GESERMSGEA RSRTDIGIPQ AQQDLAEAVA ATGKPVVVLL SNGRAMALKG
550
551
AVRNADAILV TWFLGVQTGN AIADVVFGDF NPSGRLPVSF PQASGQVPFY
600
601
YGQKRTGRPL PDYDQAMAFK TRYVDTTNRA LYPFGHGIGY APVRYDGMEL
650
651
SQDRLPIGGT LRVRATVTNT GQREAEEVVQ LYAAERAASV TRPVRELKNF
700
701
RKVRIGPGAS KVVEFTLRPD DLQFIGRDMK PTVEPGEFDL WVAPSAADGI
750
751
KKSFALTRE                                             
759
 

Show the unformatted sequence.

Checksums:
CRC64:C7C995ACB2D57F67
MD5:7587a161de697acde104f2e65a69e01d