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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: F9USZ1_LACPL (F9USZ1)

Summary

This is the summary of UniProt entry F9USZ1_LACPL (F9USZ1).

Description: Alpha-amylase, maltodextrins and cyclomaltodextrins EC=3.2.1.1
Source organism: Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) (NCBI taxonomy ID 220668)
View Pfam proteome data.
Length: 440 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 2
Pfam A Alpha-amylase 26 121
Pfam A Alpha-amylase 115 319

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F9USZ1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARDTQTQLR NEMIYSVFVR NYSEAGNFAG VTADLQRIKD LGTDILWLLP
50
51
INPIGEVNRK GTLGSPYAIK DYRGINPEYG TLADFKALTD RAHELGMKVM
100
101
LDIVYNHTSP DSVLATEHPE WFYHDADGQL TNKVGDWSDV KDLDYGHHEL
150
151
WQYQIDTLLY WSQFVDGYRC DVAPLVPLDF WLEARKQVNA KYPETLWLAE
200
201
SAGSGFIEEL RSQGYTGLSD SELYQAFDMT YDYDVFGDFK DYWQGRSTVE
250
251
RYVDLLQRQD ATFPGNYVKM RFLENHDNAR MMSLMHSKAE AVNNLTWIFM
300
301
QRGIPLIYNG QEFLAEHQPS LFDRDTMVAD RHGDVTPLIQ KLVTIKQLPL
350
351
LRAADYQLAV VEEGIVKITY RAAGEALTAW IPLKGQVTAV ATKLAAGSYQ
400
401
NLLTDGPTEV VDGKLTVDGQ PVLIKYVTNT AVTKVADQSN           
440
 

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Checksums:
CRC64:89CEB4925B2D3F0A
MD5:8e0c971ed8ac2b0557845badc00dd75c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Alpha-amylase 115 - 319 3DHU A 115 - 319 Jmol AstexViewer SPICE
B 115 - 319 Jmol AstexViewer SPICE
C 115 - 319 Jmol AstexViewer SPICE
D 115 - 319 Jmol AstexViewer SPICE
26 - 121 3DHU A 26 - 121 Jmol AstexViewer SPICE
B 26 - 121 Jmol AstexViewer SPICE
C 26 - 121 Jmol AstexViewer SPICE
D 26 - 121 Jmol AstexViewer SPICE