Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RS9A_YEAST (O13516)

Summary

This is the summary of UniProt entry RS9A_YEAST (O13516).

Description: 40S ribosomal protein S9-A
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 197 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 16
Pfam A Ribosomal_S4 5 106
Pfam A S4 107 153
disorder n/a 159 161
disorder n/a 167 197
low_complexity n/a 177 197

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O13516. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPRAPRTYSK TYSTPKRPYE SSRLDAELKL AGEFGLKNKK EIYRISFQLS
50
51
KIRRAARDLL TRDEKDPKRL FEGNALIRRL VRVGVLSEDK KKLDYVLALK
100
101
VEDFLERRLQ TQVYKLGLAK SVHHARVLIT QRHIAVGKQI VNIPSFMVRL
150
151
DSEKHIDFAP TSPFGGARPG RVARRNAARK AEASGEAADE ADEADEE   
197
 

Show the unformatted sequence.

Checksums:
CRC64:A5A3641D4D7A34F5
MD5:17a0a3c8d956a192409c68e895d0547c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S4 19 - 106 1S1H D 19 - 106 Jmol AstexViewer SPICE
21 - 106 3O2Z E 21 - 106 Jmol AstexViewer SPICE
3O30 E 21 - 106 Jmol AstexViewer SPICE
5 - 106 3IZB C 5 - 106 Jmol AstexViewer SPICE
3U5C J 5 - 106 Jmol AstexViewer SPICE
3U5G J 5 - 106 Jmol AstexViewer SPICE
S4 107 - 153 1S1H D 107 - 153 Jmol AstexViewer SPICE
3IZB C 107 - 153 Jmol AstexViewer SPICE
3O2Z E 107 - 153 Jmol AstexViewer SPICE
3O30 E 107 - 153 Jmol AstexViewer SPICE
3U5C J 107 - 153 Jmol AstexViewer SPICE
3U5G J 107 - 153 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.