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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBL_PYRHO (O58677)

Summary

This is the summary of UniProt entry RBL_PYRHO (O58677).

Description: Ribulose bisphosphate carboxylase EC=4.1.1.39
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (NCBI taxonomy ID 70601)
View Pfam proteome data.
Length: 430 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RuBisCO_large_N 11 131
Pfam A RuBisCO_large 139 425
coiled_coil n/a 196 216
disorder n/a 379 383
disorder n/a 413 414

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O58677. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MMVLRMKVEW YLDFVDLNYE PGRDELIVEY YFEPNGVSPE EAAGRIASES
50
51
SIGTWTTLWK LPEMAKRSMA KVFYLEKHGE GYIAKIAYPL TLFEEGSLVQ
100
101
LFSAVAGNVF GMKALKNLRL LDFHPPYEYL RHFKGPQFGV QGIREFMGVK
150
151
DRPLTATVPK PKMGWSVEEY AEIAYELWSG GIDLLKDDEN FTSFPFNRFE
200
201
ERVRKLYRVR DRVEAETGET KEYLINITGP VNIMEKRAEM VANEGGQYVM
250
251
IDIVVAGWSA LQYMREVTED LGLAIHAHRA MHAAFTRNPR HGITMLALAK
300
301
AARMIGVDQI HTGTAVGKMA GNYEEIKRIN DFLLSKWEHI RPVFPVASGG
350
351
LHPGLMPELI RLFGKDLVIQ AGGGVMGHPD GPRAGAKALR DAIDAAIEGV
400
401
DLDEKAKSSP ELKKSLREVG LSKAKVGVQH                      
430
 

Show the unformatted sequence.

Checksums:
CRC64:1068CA138F019AD9
MD5:3a04c80457b75c955134dbb8ce591b11

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RuBisCO_large 139 - 417 2CWX E 139 - 417 Jmol AstexViewer SPICE
139 - 418 2D69 E 139 - 418 Jmol AstexViewer SPICE
139 - 419 2D69 D 139 - 419 Jmol AstexViewer SPICE
139 - 424 2CWX A 139 - 424 Jmol AstexViewer SPICE
2CXE A 139 - 424 Jmol AstexViewer SPICE
B 139 - 424 Jmol AstexViewer SPICE
C 139 - 424 Jmol AstexViewer SPICE
D 139 - 424 Jmol AstexViewer SPICE
2D69 A 139 - 424 Jmol AstexViewer SPICE
139 - 425 2D69 B 139 - 425 Jmol AstexViewer SPICE
RuBisCO_large_N 11 - 131 2CWX A 11 - 131 Jmol AstexViewer SPICE
E 11 - 131 Jmol AstexViewer SPICE
2CXE A 11 - 131 Jmol AstexViewer SPICE
B 11 - 131 Jmol AstexViewer SPICE
C 11 - 131 Jmol AstexViewer SPICE
D 11 - 131 Jmol AstexViewer SPICE
2D69 A 11 - 131 Jmol AstexViewer SPICE
B 11 - 131 Jmol AstexViewer SPICE
D 11 - 131 Jmol AstexViewer SPICE
E 11 - 131 Jmol AstexViewer SPICE