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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: RBL1_HALNC (O85040)

Summary

This is the summary of UniProt entry RBL1_HALNC (O85040).

Description: Ribulose bisphosphate carboxylase large chain EC=4.1.1.39
Source organism: Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus) (NCBI taxonomy ID 555778)
View Pfam proteome data.
Length: 473 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RuBisCO_large_N 14 139
low_complexity n/a 44 53
disorder n/a 46 47
low_complexity n/a 56 69
Pfam A RuBisCO_large 147 455
disorder n/a 224 235
low_complexity n/a 405 413
disorder n/a 432 436

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O85040. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAVKKYSAGV KEYRQTYWMP EYTPLDSDIL ACFKITPQPG VDREEAAAAV
50
51
AAESSTGTWT TVWTDLLTDM DYYKGRAYRI EDVPGDDAAF YAFIAYPIDL
100
101
FEEGSVVNVF TSLVGNVFGF KAVRGLRLED VRFPLAYVKT CGGPPHGIQV
150
151
ERDKMNKYGR PLLGCTIKPK LGLSAKNYGR AVYECLRGGL DFTKDDENIN
200
201
SQPFMRWRDR FLFVQDATET AEAQTGERKG HYLNVTAPTP EEMYKRAEFA
250
251
KEIGAPIIMH DYITGGFTAN TGLAKWCQDN GVLLHIHRAM HAVIDRNPNH
300
301
GIHFRVLTKI LRLSGGDHLH TGTVVGKLEG DRASTLGWID LLRESFIPED
350
351
RSRGIFFDQD WGSMPGVFAV ASGGIHVWHM PALVNIFGDD SVLQFGGGTL
400
401
GHPWGNAAGA AANRVALEAC VEARNQGRDI EKEGKEILTA AAQHSPELKI
450
451
AMETWKEIKF EFDTVDKLDT QNR                             
473
 

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Checksums:
CRC64:B84D2EDE46CAF7D8
MD5:a2b3bfb805c0516685aea8afc38dba64

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RuBisCO_large 147 - 455 1SVD A 147 - 455 Jmol AstexViewer SPICE
RuBisCO_large_N 16 - 139 1SVD A 16 - 139 Jmol AstexViewer SPICE