Summary
This is the summary of UniProt entry O98949_9RHOD (O98949).
| Description: | Ribulose bisphosphate carboxylase large chain EC=4.1.1.39 |
| Source organism: |
Galdieria partita
(NCBI taxonomy ID
83374)
|
| Length: | 493 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| disorder | n/a | 1 | 4 |
| disorder | n/a | 7 | 9 |
| disorder | n/a | 12 | 13 |
| Pfam A | RuBisCO_large_N | 30 | 155 |
| low_complexity | n/a | 61 | 74 |
| Pfam A | RuBisCO_large | 163 | 470 |
| disorder | n/a | 488 | 491 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession O98949. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MSQSIEEKSV QERTRIKNSR YESGVIPYAK MGYWNPDYQV KDTDVLALFR
50 51
VTPQPGVDPI EAAAAVAGES STATWTVVWT DLLTAADLYR AKAYKVDQVP
100 101
NNPEQYFAYI AYELDLFEEG SIANLTASII GNVFGFKAVK ALRLEDMRLP
150 151
LAYLKTFQGP ATGVILERER LDKFGRPLLG CTTKPKLGLS GKNYGRVVYE
200 201
ALKGGLDFVK DDENINSQPF MRWRERYLFT MEAVNKASAA TGEVKGHYLN
250 251
VTAATMEEMY ARANFAKELG SVIIMIDLVI GYTAIQTMAK WARDNDMILH
300 301
LHRAGNSTYS RQKNHGMNFR VICKWMRMAG VDHIHAGTVV GKLEGDPIIT
350 351
RGFYKTLLLP KLERNLQEGL FFDMEWASLR KVMPVASGGI HAGQMHQLIH
400 401
YLGEDVVLQF GGGTIGHPDG IQAGATANRV ALEAMILARN ENRDYLTEGP
450 451
EILREAAKTC GALRTALDLW KDITFNYTST DTSDFVETPT ANI
493
Show the unformatted sequence. |
| Checksums: |
CRC64:FF86E3FF8C68C937
MD5:eac13f34fb5b54131f003b9a60dcee4e
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| RuBisCO_large | 163 - 470 | 1BWV | A | 154 - 462 | Jmol AstexViewer SPICE |
| C | 154 - 462 | Jmol AstexViewer SPICE | |||
| E | 154 - 462 | Jmol AstexViewer SPICE | |||
| G | 154 - 462 | Jmol AstexViewer SPICE | |||
| 1IWA | A | 154 - 462 | Jmol AstexViewer SPICE | ||
| C | 154 - 462 | Jmol AstexViewer SPICE | |||
| E | 154 - 462 | Jmol AstexViewer SPICE | |||
| G | 154 - 462 | Jmol AstexViewer SPICE | |||
| I | 154 - 462 | Jmol AstexViewer SPICE | |||
| K | 154 - 462 | Jmol AstexViewer SPICE | |||
| M | 154 - 462 | Jmol AstexViewer SPICE | |||
| O | 154 - 462 | Jmol AstexViewer SPICE | |||
| RuBisCO_large_N | 30 - 155 | 1BWV | A | 22 - 146 | Jmol AstexViewer SPICE |
| C | 22 - 146 | Jmol AstexViewer SPICE | |||
| E | 22 - 146 | Jmol AstexViewer SPICE | |||
| G | 22 - 146 | Jmol AstexViewer SPICE | |||
| 1IWA | A | 22 - 146 | Jmol AstexViewer SPICE | ||
| C | 22 - 146 | Jmol AstexViewer SPICE | |||
| E | 22 - 146 | Jmol AstexViewer SPICE | |||
| G | 22 - 146 | Jmol AstexViewer SPICE | |||
| I | 22 - 146 | Jmol AstexViewer SPICE | |||
| K | 22 - 146 | Jmol AstexViewer SPICE | |||
| M | 22 - 146 | Jmol AstexViewer SPICE | |||
| O | 22 - 146 | Jmol AstexViewer SPICE |