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21  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CY1_BOVIN (P00125)

Summary

This is the summary of UniProt entry CY1_BOVIN (P00125).

Description: Cytochrome c1, heme protein, mitochondrial
Source organism: Bos taurus (Bovine) (NCBI taxonomy ID 9913)
View Pfam proteome data.
Length: 325 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
low_complexity n/a 2 6
low_complexity n/a 14 35
low_complexity n/a 45 59
transmembrane n/a 59 82
low_complexity n/a 61 85
Pfam A Cytochrom_C1 96 314
disorder n/a 149 154
disorder n/a 156 163
disorder n/a 185 188
low_complexity n/a 285 300
transmembrane n/a 288 306

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00125. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAAAATLRG AMVGPRGAGL PGARARGLLC GARPGQLPLR TPQAVSLSSK
50
51
SGLSRGRKVI LSALGMLAAG GAGLAVALHS AVSASDLELH PPSYPWSHRG
100
101
LLSSLDHTSI RRGFQVYKQV CSSCHSMDYV AYRHLVGVCY TEDEAKALAE
150
151
EVEVQDGPNE DGEMFMRPGK LSDYFPKPYP NPEAARAANN GALPPDLSYI
200
201
VRARHGGEDY VFSLLTGYCE PPTGVSLREG LYFNPYFPGQ AIGMAPPIYN
250
251
EVLEFDDGTP ATMSQVAKDV CTFLRWAAEP EHDHRKRMGL KMLLMMGLLL
300
301
PLVYAMKRHK WSVLKSRKLA YRPPK                           
325
 

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Checksums:
CRC64:588ED1DEFEAABD6D
MD5:d3ee30d1cbe50e69d76cca4e2e8ee022

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Cytochrom_C1 96 - 314 1BCC D 12 - 230 Jmol AstexViewer SPICE
1BE3 D 12 - 230 Jmol AstexViewer SPICE
1BGY D 12 - 230 Jmol AstexViewer SPICE
P 12 - 230 Jmol AstexViewer SPICE
1L0L D 12 - 230 Jmol AstexViewer SPICE
1L0N D 12 - 230 Jmol AstexViewer SPICE
1NTK D 12 - 230 Jmol AstexViewer SPICE
1NTM D 12 - 230 Jmol AstexViewer SPICE
1NTZ D 12 - 230 Jmol AstexViewer SPICE
1NU1 D 12 - 230 Jmol AstexViewer SPICE
1PP9 D 12 - 230 Jmol AstexViewer SPICE
Q 12 - 230 Jmol AstexViewer SPICE
1PPJ D 12 - 230 Jmol AstexViewer SPICE
Q 12 - 230 Jmol AstexViewer SPICE
1SQB D 12 - 230 Jmol AstexViewer SPICE
1SQP D 12 - 230 Jmol AstexViewer SPICE
1SQQ D 12 - 230 Jmol AstexViewer SPICE
1SQV D 12 - 230 Jmol AstexViewer SPICE
1SQX D 12 - 230 Jmol AstexViewer SPICE
2A06 D 12 - 230 Jmol AstexViewer SPICE
Q 12 - 230 Jmol AstexViewer SPICE
2BCC D 12 - 230 Jmol AstexViewer SPICE
2FYU D 12 - 230 Jmol AstexViewer SPICE
2YBB D 12 - 230 Jmol AstexViewer SPICE
d 12 - 230 Jmol AstexViewer SPICE
3BCC D 12 - 230 Jmol AstexViewer SPICE