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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CYB2_YEAST (P00175)

Summary

This is the summary of UniProt entry CYB2_YEAST (P00175).

Description: Cytochrome b2, mitochondrial EC=1.1.2.3
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 591 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 40 44
transmembrane n/a 54 73
disorder n/a 82 95
Pfam A Cyt-b5 90 240
disorder n/a 172 175
disorder n/a 179 180
Pfam A FMN_dh 212 560
disorder n/a 293 294
disorder n/a 372 375
disorder n/a 377 380
disorder n/a 382 393

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00175. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLKYKPLLKI SKNCEAAILR ASKTRLNTIR AYGSTVPKSK SFEQDSRKRT
50
51
QSWTALRVGA ILAATSSVAY LNWHNGQIDN EPKLDMNKQK ISPAEVAKHN
100
101
KPDDCWVVIN GYVYDLTRFL PNHPGGQDVI KFNAGKDVTA IFEPLHAPNV
150
151
IDKYIAPEKK LGPLQGSMPP ELVCPPYAPG ETKEDIARKE QLKSLLPPLD
200
201
NIINLYDFEY LASQTLTKQA WAYYSSGAND EVTHRENHNA YHRIFFKPKI
250
251
LVDVRKVDIS TDMLGSHVDV PFYVSATALC KLGNPLEGEK DVARGCGQGV
300
301
TKVPQMISTL ASCSPEEIIE AAPSDKQIQW YQLYVNSDRK ITDDLVKNVE
350
351
KLGVKALFVT VDAPSLGQRE KDMKLKFSNT KAGPKAMKKT NVEESQGASR
400
401
ALSKFIDPSL TWKDIEELKK KTKLPIVIKG VQRTEDVIKA AEIGVSGVVL
450
451
SNHGGRQLDF SRAPIEVLAE TMPILEQRNL KDKLEVFVDG GVRRGTDVLK
500
501
ALCLGAKGVG LGRPFLYANS CYGRNGVEKA IEILRDEIEM SMRLLGVTSI
550
551
AELKPDLLDL STLKARTVGV PNDVLYNEVY EGPTLTEFED A         
591
 

Show the unformatted sequence.

Checksums:
CRC64:DBADA0751B3C5B83
MD5:e3c19603c9e38316643f09a0628ca172

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Cyt-b5 178 - 240 2OZ0 B 98 - 160 Jmol AstexViewer SPICE
179 - 240 1KBI B 99 - 160 Jmol AstexViewer SPICE
180 - 240 1FCB B 100 - 160 Jmol AstexViewer SPICE
1KBJ A 100 - 160 Jmol AstexViewer SPICE
B 100 - 160 Jmol AstexViewer SPICE
1SZE A 100 - 160 Jmol AstexViewer SPICE
B 100 - 160 Jmol AstexViewer SPICE
1SZF A 100 - 160 Jmol AstexViewer SPICE
B 100 - 160 Jmol AstexViewer SPICE
1SZG A 100 - 160 Jmol AstexViewer SPICE
182 - 240 1LCO B 102 - 160 Jmol AstexViewer SPICE
1LDC B 102 - 160 Jmol AstexViewer SPICE
1LTD B 102 - 160 Jmol AstexViewer SPICE
1QCW A 102 - 160 Jmol AstexViewer SPICE
B 102 - 160 Jmol AstexViewer SPICE
1SZG B 102 - 160 Jmol AstexViewer SPICE
90 - 177 3KS0 A 10 - 97 Jmol AstexViewer SPICE
B 10 - 97 Jmol AstexViewer SPICE
90 - 240 1FCB A 10 - 160 Jmol AstexViewer SPICE
1KBI A 10 - 160 Jmol AstexViewer SPICE
1LCO A 10 - 160 Jmol AstexViewer SPICE
1LDC A 10 - 160 Jmol AstexViewer SPICE
1LTD A 10 - 160 Jmol AstexViewer SPICE
2OZ0 A 10 - 160 Jmol AstexViewer SPICE
FMN_dh 212 - 560 1FCB A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1KBI A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1KBJ A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1LCO A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1LDC A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1LTD A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1QCW A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1SZE A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1SZF A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
1SZG A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE
2OZ0 A 132 - 480 Jmol AstexViewer SPICE
B 132 - 480 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.