Summary
This is the summary of UniProt entry COX1_BOVIN (P00396).
| Description: | Cytochrome c oxidase subunit 1 EC=1.9.3.1 |
| Source organism: |
Bos taurus (Bovine)
(NCBI taxonomy ID
9913)
View Pfam proteome data. |
| Length: | 514 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam A | COX1 | 12 | 461 |
| transmembrane | n/a | 18 | 37 |
| transmembrane | n/a | 57 | 83 |
| low_complexity | n/a | 63 | 79 |
| low_complexity | n/a | 101 | 116 |
| transmembrane | n/a | 104 | 128 |
| transmembrane | n/a | 148 | 171 |
| transmembrane | n/a | 183 | 210 |
| low_complexity | n/a | 192 | 204 |
| transmembrane | n/a | 243 | 261 |
| transmembrane | n/a | 268 | 291 |
| transmembrane | n/a | 303 | 325 |
| transmembrane | n/a | 337 | 359 |
| transmembrane | n/a | 379 | 400 |
| transmembrane | n/a | 412 | 433 |
| transmembrane | n/a | 453 | 473 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession P00396. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MFINRWLFST NHKDIGTLYL LFGAWAGMVG TALSLLIRAE LGQPGTLLGD
50 51
DQIYNVVVTA HAFVMIFFMV MPIMIGGFGN WLVPLMIGAP DMAFPRMNNM
100 101
SFWLLPPSFL LLLASSMVEA GAGTGWTVYP PLAGNLAHAG ASVDLTIFSL
150 151
HLAGVSSILG AINFITTIIN MKPPAMSQYQ TPLFVWSVMI TAVLLLLSLP
200 201
VLAAGITMLL TDRNLNTTFF DPAGGGDPIL YQHLFWFFGH PEVYILILPG
250 251
FGMISHIVTY YSGKKEPFGY MGMVWAMMSI GFLGFIVWAH HMFTVGMDVD
300 301
TRAYFTSATM IIAIPTGVKV FSWLATLHGG NIKWSPAMMW ALGFIFLFTV
350 351
GGLTGIVLAN SSLDIVLHDT YYVVAHFHYV LSMGAVFAIM GGFVHWFPLF
400 401
SGYTLNDTWA KIHFAIMFVG VNMTFFPQHF LGLSGMPRRY SDYPDAYTMW
450 451
NTISSMGSFI SLTAVMLMVF IIWEAFASKR EVLTVDLTTT NLEWLNGCPP
500 501
PYHTFEEPTY VNLK
514
Show the unformatted sequence. |
| Checksums: |
CRC64:0D7C807D7FA3996C
MD5:2c86dc04a3c82071c95cd14c7b63f09e
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.