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26  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: COX1_BOVIN (P00396)

Summary

This is the summary of UniProt entry COX1_BOVIN (P00396).

Description: Cytochrome c oxidase subunit 1 EC=1.9.3.1
Source organism: Bos taurus (Bovine) (NCBI taxonomy ID 9913)
View Pfam proteome data.
Length: 514 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A COX1 12 461
transmembrane n/a 18 37
transmembrane n/a 57 83
low_complexity n/a 63 79
low_complexity n/a 101 116
transmembrane n/a 104 128
transmembrane n/a 148 171
transmembrane n/a 183 210
low_complexity n/a 192 204
transmembrane n/a 243 261
transmembrane n/a 268 291
transmembrane n/a 303 325
transmembrane n/a 337 359
transmembrane n/a 379 400
transmembrane n/a 412 433
transmembrane n/a 453 473

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00396. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MFINRWLFST NHKDIGTLYL LFGAWAGMVG TALSLLIRAE LGQPGTLLGD
50
51
DQIYNVVVTA HAFVMIFFMV MPIMIGGFGN WLVPLMIGAP DMAFPRMNNM
100
101
SFWLLPPSFL LLLASSMVEA GAGTGWTVYP PLAGNLAHAG ASVDLTIFSL
150
151
HLAGVSSILG AINFITTIIN MKPPAMSQYQ TPLFVWSVMI TAVLLLLSLP
200
201
VLAAGITMLL TDRNLNTTFF DPAGGGDPIL YQHLFWFFGH PEVYILILPG
250
251
FGMISHIVTY YSGKKEPFGY MGMVWAMMSI GFLGFIVWAH HMFTVGMDVD
300
301
TRAYFTSATM IIAIPTGVKV FSWLATLHGG NIKWSPAMMW ALGFIFLFTV
350
351
GGLTGIVLAN SSLDIVLHDT YYVVAHFHYV LSMGAVFAIM GGFVHWFPLF
400
401
SGYTLNDTWA KIHFAIMFVG VNMTFFPQHF LGLSGMPRRY SDYPDAYTMW
450
451
NTISSMGSFI SLTAVMLMVF IIWEAFASKR EVLTVDLTTT NLEWLNGCPP
500
501
PYHTFEEPTY VNLK                                       
514
 

Show the unformatted sequence.

Checksums:
CRC64:0D7C807D7FA3996C
MD5:2c86dc04a3c82071c95cd14c7b63f09e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
COX1 12 - 461 1OCC A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
1OCO A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
1OCR A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
1OCZ A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
1V54 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
1V55 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2DYR A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2DYS A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2EIJ A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2EIK A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2EIL A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2EIM A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2EIN A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2OCC A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2Y69 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
2YBB L 12 - 461 Jmol AstexViewer SPICE
2ZXW A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3ABK A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3ABL A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3ABM A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3AG1 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3AG2 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3AG3 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3AG4 A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3ASN A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE
3ASO A 12 - 461 Jmol AstexViewer SPICE
N 12 - 461 Jmol AstexViewer SPICE