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26  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: COX5A_BOVIN (P00426)

Summary

This is the summary of UniProt entry COX5A_BOVIN (P00426).

Description: Cytochrome c oxidase subunit 5A, mitochondrial
Source organism: Bos taurus (Bovine) (NCBI taxonomy ID 9913)
View Pfam proteome data.
Length: 152 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 34
low_complexity n/a 4 20
disorder n/a 27 28
Pfam A COX5A 44 151

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00426. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLGAAVRRCS VAAAAVARAS PRGLLHPTPA PGQAAAVQSL RCYSHGSHET
50
51
DEEFDARWVT YFNKPDIDAW ELRKGMNTLV GYDLVPEPKI IDAALRACRR
100
101
LNDFASAVRI LEVVKDKAGP HKEIYPYVIQ ELRPTLNELG ISTPEELGLD
150
151
KV                                                    
152
 

Show the unformatted sequence.

Checksums:
CRC64:CE8FA765A8ABBA02
MD5:5cff34213ea1b0142a9b93de61e2e6ed

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
COX5A 44 - 151 1OCC E 1 - 108 Jmol AstexViewer SPICE
R 1 - 108 Jmol AstexViewer SPICE
1OCO E 1 - 108 Jmol AstexViewer SPICE
R 1 - 108 Jmol AstexViewer SPICE
1OCR E 1 - 108 Jmol AstexViewer SPICE
R 1 - 108 Jmol AstexViewer SPICE
1OCZ E 1 - 108 Jmol AstexViewer SPICE
R 1 - 108 Jmol AstexViewer SPICE
2YBB P 1 - 108 Jmol AstexViewer SPICE
48 - 151 1V54 E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
1V55 E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2DYR E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2DYS E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2EIJ E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2EIK E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2EIL E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2EIM E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2EIN E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
2OCC E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3ABK E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3AG1 E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3AG2 E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3AG3 E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3AG4 E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3ASN E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
3ASO E 5 - 108 Jmol AstexViewer SPICE
R 5 - 108 Jmol AstexViewer SPICE
49 - 151 2Y69 E 6 - 108 Jmol AstexViewer SPICE
R 6 - 108 Jmol AstexViewer SPICE
2ZXW E 6 - 108 Jmol AstexViewer SPICE
R 6 - 108 Jmol AstexViewer SPICE
3ABL E 6 - 108 Jmol AstexViewer SPICE
R 6 - 108 Jmol AstexViewer SPICE
3ABM E 6 - 108 Jmol AstexViewer SPICE
R 6 - 108 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.