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8  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: F13A_HUMAN (P00488)

Summary

This is the summary of UniProt entry F13A_HUMAN (P00488).

Description: Coagulation factor XIII A chain EC=2.3.2.13
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 732 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 3
disorder n/a 5 30
Pfam A Transglut_N 46 167
disorder n/a 69 71
Pfam A Transglut_core 282 398
Pfam B Pfam-B_19709 431 479
Pfam A Transglut_C 519 623
Pfam A Transglut_C 631 728
disorder n/a 677 680

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00488. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSETSRTAFG GRRAVPPNNS NAAEDDLPTV ELQGVVPRGV NLQEFLNVTS
50
51
VHLFKERWDT NKVDHHTDKY ENNKLIVRRG QSFYVQIDFS RPYDPRRDLF
100
101
RVEYVIGRYP QENKGTYIPV PIVSELQSGK WGAKIVMRED RSVRLSIQSS
150
151
PKCIVGKFRM YVAVWTPYGV LRTSRNPETD TYILFNPWCE DDAVYLDNEK
200
201
EREEYVLNDI GVIFYGEVND IKTRSWSYGQ FEDGILDTCL YVMDRAQMDL
250
251
SGRGNPIKVS RVGSAMVNAK DDEGVLVGSW DNIYAYGVPP SAWTGSVDIL
300
301
LEYRSSENPV RYGQCWVFAG VFNTFLRCLG IPARIVTNYF SAHDNDANLQ
350
351
MDIFLEEDGN VNSKLTKDSV WNYHCWNEAW MTRPDLPVGF GGWQAVDSTP
400
401
QENSDGMYRC GPASVQAIKH GHVCFQFDAP FVFAEVNSDL IYITAKKDGT
450
451
HVVENVDATH IGKLIVTKQI GGDGMMDITD TYKFQEGQEE ERLALETALM
500
501
YGAKKPLNTE GVMKSRSNVD MDFEVENAVL GKDFKLSITF RNNSHNRYTI
550
551
TAYLSANITF YTGVPKAEFK KETFDVTLEP LSFKKEAVLI QAGEYMGQLL
600
601
EQASLHFFVT ARINETRDVL AKQKSTVLTI PEIIIKVRGT QVVGSDMTVT
650
651
VQFTNPLKET LRNVWVHLDG PGVTRPMKKM FREIRPNSTV QWEEVCRPWV
700
701
SGHRKLIASM SSDSLRHVYG ELDVQIQRRP SM                   
732
 

Show the unformatted sequence.

Checksums:
CRC64:51A83A9B8B1370D4
MD5:e394364b14d375232eb4508a0caca8a6

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Transglut_C 519 - 623 1EVU A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1EX0 A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1F13 A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1FIE A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1GGT A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1GGU A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1GGY A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
1QRK A 518 - 622 Jmol AstexViewer SPICE
B 518 - 622 Jmol AstexViewer SPICE
631 - 728 1EVU A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1EX0 A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1F13 A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1FIE A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1GGT A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1GGU A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1GGY A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
1QRK A 630 - 727 Jmol AstexViewer SPICE
B 630 - 727 Jmol AstexViewer SPICE
Transglut_core 282 - 398 1EVU A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1EX0 A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1F13 A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1FIE A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1GGT A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1GGU A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1GGY A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
1QRK A 281 - 397 Jmol AstexViewer SPICE
B 281 - 397 Jmol AstexViewer SPICE
Transglut_N 46 - 167 1EVU A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1EX0 A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1F13 A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1FIE A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1GGT A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1GGU A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1GGY A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE
1QRK A 45 - 166 Jmol AstexViewer SPICE
B 45 - 166 Jmol AstexViewer SPICE