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22  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PAPA1_CARPA (P00784)

Summary

This is the summary of UniProt entry PAPA1_CARPA (P00784).

Description: Papain EC=3.4.22.2
Source organism: Carica papaya (Papaya) (NCBI taxonomy ID 3649)
Length: 345 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 26
Pfam A Inhibitor_I29 48 104
Pfam A Peptidase_C1 134 343

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00784. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAMIPSISKL LFVAICLFVY MGLSFGDFSI VGYSQNDLTS TERLIQLFES
50
51
WMLKHNKIYK NIDEKIYRFE IFKDNLKYID ETNKKNNSYW LGLNVFADMS
100
101
NDEFKEKYTG SIAGNYTTTE LSYEEVLNDG DVNIPEYVDW RQKGAVTPVK
150
151
NQGSCGSCWA FSAVVTIEGI IKIRTGNLNE YSEQELLDCD RRSYGCNGGY
200
201
PWSALQLVAQ YGIHYRNTYP YEGVQRYCRS REKGPYAAKT DGVRQVQPYN
250
251
EGALLYSIAN QPVSVVLEAA GKDFQLYRGG IFVGPCGNKV DHAVAAVGYG
300
301
PNYILIKNSW GTGWGENGYI RIKRGTGNSY GVCGLYTSSF YPVKN     
345
 

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Checksums:
CRC64:82D9FB35EDCA12EF
MD5:c799adb28473bb4959c09f2c8d63aecf

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Peptidase_C1 134 - 343 1BP4 A 1 - 210 Jmol AstexViewer SPICE
1BQI A 1 - 210 Jmol AstexViewer SPICE
1CVZ A 1 - 210 Jmol AstexViewer SPICE
1KHP A 1 - 210 Jmol AstexViewer SPICE
1KHQ A 1 - 210 Jmol AstexViewer SPICE
1PAD A 1 - 210 Jmol AstexViewer SPICE
1PE6 A 1 - 210 Jmol AstexViewer SPICE
1PIP A 1 - 210 Jmol AstexViewer SPICE
1POP A 1 - 210 Jmol AstexViewer SPICE
1PPD A 1 - 210 Jmol AstexViewer SPICE
1PPN A 1 - 210 Jmol AstexViewer SPICE
1PPP A 1 - 210 Jmol AstexViewer SPICE
1STF E 1 - 210 Jmol AstexViewer SPICE
2CIO A 1 - 210 Jmol AstexViewer SPICE
2PAD A 1 - 210 Jmol AstexViewer SPICE
3E1Z B 1 - 210 Jmol AstexViewer SPICE
3IMA A 1 - 210 Jmol AstexViewer SPICE
C 1 - 210 Jmol AstexViewer SPICE
3LFY A 1 - 210 Jmol AstexViewer SPICE
C 1 - 210 Jmol AstexViewer SPICE
4PAD A 1 - 210 Jmol AstexViewer SPICE
5PAD A 1 - 210 Jmol AstexViewer SPICE
6PAD A 1 - 210 Jmol AstexViewer SPICE
9PAP A 1 - 210 Jmol AstexViewer SPICE