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12  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBS1_CHLRE (P00873)

Summary

This is the summary of UniProt entry RBS1_CHLRE (P00873).

Description: Ribulose bisphosphate carboxylase small chain 1, chloroplastic EC=4.1.1.39
Source organism: Chlamydomonas reinhardtii (Chlamydomonas smithii) (NCBI taxonomy ID 3055)
View Pfam proteome data.
Length: 185 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
low_complexity n/a 2 23
low_complexity n/a 26 43
Pfam A RuBisCO_small 56 172

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00873. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAVIAKSSV SAAVARPARS SVRPMAALKP AVKAAPVAAP AQANQMMVWT
50
51
PVNNKMFETF SYLPPLTDEQ IAAQVDYIVA NGWIPCLEFA EADKAYVSNE
100
101
SAIRFGSVSC LYYDNRYWTM WKLPMFGCRD PMQVLREIVA CTKAFPDAYV
150
151
RLVAFDNQKQ VQIMGFLVQR PKTARDFQPA NKRSV                
185
 

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Checksums:
CRC64:B4114FD98E807F16
MD5:f492a08e913ccea7bac2476e6eaf2daa

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RuBisCO_small 56 - 171 1GK8 I 11 - 126 Jmol AstexViewer SPICE
K 11 - 126 Jmol AstexViewer SPICE
M 11 - 126 Jmol AstexViewer SPICE
O 11 - 126 Jmol AstexViewer SPICE
56 - 172 1UW9 C 11 - 127 Jmol AstexViewer SPICE
F 11 - 127 Jmol AstexViewer SPICE
I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
T 11 - 127 Jmol AstexViewer SPICE
W 11 - 127 Jmol AstexViewer SPICE
1UWA C 11 - 127 Jmol AstexViewer SPICE
F 11 - 127 Jmol AstexViewer SPICE
I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
T 11 - 127 Jmol AstexViewer SPICE
W 11 - 127 Jmol AstexViewer SPICE
1UZD C 11 - 121 Jmol AstexViewer SPICE
F 11 - 121 Jmol AstexViewer SPICE
I 11 - 121 Jmol AstexViewer SPICE
J 11 - 121 Jmol AstexViewer SPICE
M 11 - 121 Jmol AstexViewer SPICE
P 11 - 121 Jmol AstexViewer SPICE
T 11 - 121 Jmol AstexViewer SPICE
W 11 - 121 Jmol AstexViewer SPICE
1UZH C 11 - 109 Jmol AstexViewer SPICE
F 11 - 109 Jmol AstexViewer SPICE
I 11 - 109 Jmol AstexViewer SPICE
J 11 - 109 Jmol AstexViewer SPICE
M 11 - 109 Jmol AstexViewer SPICE
P 11 - 109 Jmol AstexViewer SPICE
T 11 - 109 Jmol AstexViewer SPICE
W 11 - 109 Jmol AstexViewer SPICE
2V63 I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
2V67 I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
2V68 I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
2V69 I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
2V6A I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
2VDH I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE
2VDI I 11 - 127 Jmol AstexViewer SPICE
J 11 - 127 Jmol AstexViewer SPICE
K 11 - 127 Jmol AstexViewer SPICE
L 11 - 127 Jmol AstexViewer SPICE
M 11 - 127 Jmol AstexViewer SPICE
N 11 - 127 Jmol AstexViewer SPICE
O 11 - 127 Jmol AstexViewer SPICE
P 11 - 127 Jmol AstexViewer SPICE