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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBL_SYNP6 (P00880)

Summary

This is the summary of UniProt entry RBL_SYNP6 (P00880).

Description: Ribulose bisphosphate carboxylase large chain EC=4.1.1.39
Source organism: Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) (NCBI taxonomy ID 269084)
View Pfam proteome data.
Length: 472 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
low_complexity n/a 15 34
Pfam A RuBisCO_large_N 18 143
low_complexity n/a 47 73
disorder n/a 50 51
Pfam A RuBisCO_large 151 459

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P00880. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPKTQSAAGY KAGVKDYKLT YYTPDYTPKD TDLLAAFRFS PQPGVPADEA
50
51
GAAIAAESST GTWTTVWTDL LTDMDRYKGK CYHIEPVQGE ENSYFAFIAY
100
101
PLDLFEEGSV TNILTSIVGN VFGFKAIRSL RLEDIRFPVA LVKTFQGPPH
150
151
GIQVERDLLN KYGRPMLGCT IKPKLGLSAK NYGRAVYECL RGGLDFTKDD
200
201
ENINSQPFQR WRDRFLFVAD AIHKSQAETG EIKGHYLNVT APTCEEMMKR
250
251
AEFAKELGMP IIMHDFLTAG FTANTTLAKW CRDNGVLLHI HRAMHAVIDR
300
301
QRNHGIHFRV LAKCLRLSGG DHLHSGTVVG KLEGDKASTL GFVDLMREDH
350
351
IEADRSRGVF FTQDWASMPG VLPVASGGIH VWHMPALVEI FGDDSVLQFG
400
401
GGTLGHPWGN APGATANRVA LEACVQARNE GRDLYREGGD ILREAGKWSP
450
451
ELAAALDLWK EIKFEFETMD KL                              
472
 

Show the unformatted sequence.

Checksums:
CRC64:CDD8519AA9D493C9
MD5:90c0b0b0c01d7a392c5a871f54e276f8

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RuBisCO_large 151 - 459 1RBL A 154 - 462 Jmol AstexViewer SPICE
B 154 - 462 Jmol AstexViewer SPICE
C 154 - 462 Jmol AstexViewer SPICE
D 154 - 462 Jmol AstexViewer SPICE
E 154 - 462 Jmol AstexViewer SPICE
F 154 - 462 Jmol AstexViewer SPICE
G 154 - 462 Jmol AstexViewer SPICE
H 154 - 462 Jmol AstexViewer SPICE
1RSC A 154 - 462 Jmol AstexViewer SPICE
B 154 - 462 Jmol AstexViewer SPICE
C 154 - 462 Jmol AstexViewer SPICE
D 154 - 462 Jmol AstexViewer SPICE
E 154 - 462 Jmol AstexViewer SPICE
F 154 - 462 Jmol AstexViewer SPICE
G 154 - 462 Jmol AstexViewer SPICE
H 154 - 462 Jmol AstexViewer SPICE
2WVW A 154 - 462 Jmol AstexViewer SPICE
B 154 - 462 Jmol AstexViewer SPICE
C 154 - 462 Jmol AstexViewer SPICE
D 154 - 462 Jmol AstexViewer SPICE
E 154 - 462 Jmol AstexViewer SPICE
F 154 - 462 Jmol AstexViewer SPICE
G 154 - 462 Jmol AstexViewer SPICE
H 154 - 462 Jmol AstexViewer SPICE
3RG6 A 151 - 459 Jmol AstexViewer SPICE
B 151 - 459 Jmol AstexViewer SPICE
RuBisCO_large_N 18 - 143 1RBL A 21 - 146 Jmol AstexViewer SPICE
B 21 - 146 Jmol AstexViewer SPICE
C 21 - 146 Jmol AstexViewer SPICE
D 21 - 146 Jmol AstexViewer SPICE
E 21 - 146 Jmol AstexViewer SPICE
F 21 - 146 Jmol AstexViewer SPICE
G 21 - 146 Jmol AstexViewer SPICE
H 21 - 146 Jmol AstexViewer SPICE
1RSC A 21 - 146 Jmol AstexViewer SPICE
B 21 - 146 Jmol AstexViewer SPICE
C 21 - 146 Jmol AstexViewer SPICE
D 21 - 146 Jmol AstexViewer SPICE
E 21 - 146 Jmol AstexViewer SPICE
F 21 - 146 Jmol AstexViewer SPICE
G 21 - 146 Jmol AstexViewer SPICE
H 21 - 146 Jmol AstexViewer SPICE
2WVW A 21 - 146 Jmol AstexViewer SPICE
B 21 - 146 Jmol AstexViewer SPICE
C 21 - 146 Jmol AstexViewer SPICE
D 21 - 146 Jmol AstexViewer SPICE
E 21 - 146 Jmol AstexViewer SPICE
F 21 - 146 Jmol AstexViewer SPICE
G 21 - 146 Jmol AstexViewer SPICE
H 21 - 146 Jmol AstexViewer SPICE
3RG6 A 18 - 143 Jmol AstexViewer SPICE
B 18 - 143 Jmol AstexViewer SPICE