Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
43  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: TCA_HUMAN (P01848)

Summary

This is the summary of UniProt entry TCA_HUMAN (P01848).

Description: T-cell receptor alpha chain C region
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 142 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 12
Pfam A DUF1968 8 91
transmembrane n/a 119 140

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P01848. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
PNIQNPDPAV YQLRDSKSSD KSVCLFTDFD SQTNVSQSKD SDVYITDKTV
50
51
LDMRSMDFKS NSAVAWSNKS DFACANAFNN SIIPEDTFFP SPESSCDVKL
100
101
VEKSFETDTN LNFQNLSVIG FRILLLKVAG FNLLMTLRLW SS        
142
 

Show the unformatted sequence.

Checksums:
CRC64:D46B44171D5784EE
MD5:b8e3b122c551a9e30bfde101f107cb38

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
DUF1968 45 - 47 2BNU B 53 - 55 Jmol AstexViewer SPICE
8 - 79 2NX5 D 123 - 194 Jmol AstexViewer SPICE
I 123 - 194 Jmol AstexViewer SPICE
N 123 - 194 Jmol AstexViewer SPICE
T 123 - 194 Jmol AstexViewer SPICE
2P5W D 121 - 192 Jmol AstexViewer SPICE
8 - 84 2PYF A 121 - 197 Jmol AstexViewer SPICE
8 - 87 3HG1 D 116 - 195 Jmol AstexViewer SPICE
8 - 88 1J8H D 123 - 203 Jmol AstexViewer SPICE
1ZGL M 123 - 203 Jmol AstexViewer SPICE
Q 123 - 203 Jmol AstexViewer SPICE
S 123 - 203 Jmol AstexViewer SPICE
3O6F C 116 - 196 Jmol AstexViewer SPICE
G 116 - 196 Jmol AstexViewer SPICE
3QEQ D 115 - 195 Jmol AstexViewer SPICE
3SDD C 123 - 203 Jmol AstexViewer SPICE
8 - 89 3QDM D 115 - 196 Jmol AstexViewer SPICE
3SCM C 123 - 204 Jmol AstexViewer SPICE
3SDA C 123 - 204 Jmol AstexViewer SPICE
3SDC C 123 - 204 Jmol AstexViewer SPICE
8 - 90 1ZGL U 123 - 205 Jmol AstexViewer SPICE
2EYR A 123 - 205 Jmol AstexViewer SPICE
2EYS A 123 - 205 Jmol AstexViewer SPICE
2EYT A 123 - 205 Jmol AstexViewer SPICE
C 123 - 205 Jmol AstexViewer SPICE
8 - 91 1KGC D 123 - 206 Jmol AstexViewer SPICE
1OGA D 118 - 201 Jmol AstexViewer SPICE
1QRN D 123 - 206 Jmol AstexViewer SPICE
2AK4 D 123 - 206 Jmol AstexViewer SPICE
I 123 - 206 Jmol AstexViewer SPICE
N 123 - 206 Jmol AstexViewer SPICE
T 123 - 206 Jmol AstexViewer SPICE
2BNQ D 121 - 204 Jmol AstexViewer SPICE
2BNR D 121 - 204 Jmol AstexViewer SPICE
2BNU A 121 - 204 Jmol AstexViewer SPICE
2ESV D 122 - 205 Jmol AstexViewer SPICE
2F54 D 120 - 203 Jmol AstexViewer SPICE
K 120 - 203 Jmol AstexViewer SPICE
2GJ6 D 123 - 206 Jmol AstexViewer SPICE
2IAL A 115 - 198 Jmol AstexViewer SPICE
C 115 - 198 Jmol AstexViewer SPICE
2IAM C 115 - 198 Jmol AstexViewer SPICE
2IAN D 115 - 198 Jmol AstexViewer SPICE
I 115 - 198 Jmol AstexViewer SPICE
N 115 - 198 Jmol AstexViewer SPICE
S 115 - 198 Jmol AstexViewer SPICE
2XN9 A 117 - 200 Jmol AstexViewer SPICE
2XNA A 117 - 200 Jmol AstexViewer SPICE
3DXA D 131 - 214 Jmol AstexViewer SPICE
I 131 - 214 Jmol AstexViewer SPICE
N 131 - 214 Jmol AstexViewer SPICE
3GSN A 117 - 200 Jmol AstexViewer SPICE
3KPR D 123 - 206 Jmol AstexViewer SPICE
I 123 - 206 Jmol AstexViewer SPICE
3KPS D 123 - 206 Jmol AstexViewer SPICE
3KXF D 121 - 204 Jmol AstexViewer SPICE
G 121 - 204 Jmol AstexViewer SPICE
M 121 - 204 Jmol AstexViewer SPICE
N 121 - 204 Jmol AstexViewer SPICE
3O8X C 123 - 206 Jmol AstexViewer SPICE
3O9W C 123 - 206 Jmol AstexViewer SPICE
3QDG D 116 - 199 Jmol AstexViewer SPICE
3QDJ D 116 - 199 Jmol AstexViewer SPICE
3QEU A 116 - 199 Jmol AstexViewer SPICE
D 116 - 199 Jmol AstexViewer SPICE
3SDX E 120 - 203 Jmol AstexViewer SPICE
G 120 - 203 Jmol AstexViewer SPICE
3SKN A 130 - 213 Jmol AstexViewer SPICE
C 130 - 213 Jmol AstexViewer SPICE
E 130 - 213 Jmol AstexViewer SPICE
G 130 - 213 Jmol AstexViewer SPICE