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22  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: TRBC1_HUMAN (P01850)

Summary

This is the summary of UniProt entry TRBC1_HUMAN (P01850).

Description: T-cell receptor beta-1 chain C region
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 177 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A C1-set 15 108
disorder n/a 56 63
transmembrane n/a 147 172
low_complexity n/a 156 172

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P01850. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
EDLNKVFPPE VAVFEPSEAE ISHTQKATLV CLATGFFPDH VELSWWVNGK
50
51
EVHSGVSTDP QPLKEQPALN DSRYCLSSRL RVSATFWQNP RNHFRCQVQF
100
101
YGLSENDEWT QDRAKPVTQI VSAEAWGRAD CGFTSVSYQQ GVLSATILYE
150
151
ILLGKATLYA VLVSALVLMA MVKRKDF                         
177
 

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Checksums:
CRC64:9242AFAA3E3DB4AE
MD5:69040f7b912da64505da0e9451299ca5

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
C1-set 15 - 101 1KTK F 131 - 217 Jmol AstexViewer SPICE
15 - 108 1FYT E 132 - 225 Jmol AstexViewer SPICE
1J8H E 132 - 225 Jmol AstexViewer SPICE
1KGC E 132 - 225 Jmol AstexViewer SPICE
1KTK E 131 - 224 Jmol AstexViewer SPICE
1MI5 E 132 - 225 Jmol AstexViewer SPICE
1OGA E 129 - 222 Jmol AstexViewer SPICE
1YMM E 133 - 226 Jmol AstexViewer SPICE
1ZGL P 132 - 225 Jmol AstexViewer SPICE
R 132 - 225 Jmol AstexViewer SPICE
V 132 - 225 Jmol AstexViewer SPICE
2AK4 E 132 - 225 Jmol AstexViewer SPICE
J 132 - 225 Jmol AstexViewer SPICE
P 132 - 225 Jmol AstexViewer SPICE
U 132 - 225 Jmol AstexViewer SPICE
2AXH A 129 - 222 Jmol AstexViewer SPICE
B 129 - 222 Jmol AstexViewer SPICE
2BNR E 127 - 220 Jmol AstexViewer SPICE
2BNU B 127 - 220 Jmol AstexViewer SPICE
2ESV E 132 - 225 Jmol AstexViewer SPICE
2F54 E 126 - 219 Jmol AstexViewer SPICE
L 126 - 219 Jmol AstexViewer SPICE
2GJ6 E 131 - 224 Jmol AstexViewer SPICE
2IAL B 125 - 218 Jmol AstexViewer SPICE
D 125 - 218 Jmol AstexViewer SPICE
2IAM D 125 - 218 Jmol AstexViewer SPICE
2IAN E 125 - 218 Jmol AstexViewer SPICE
J 125 - 218 Jmol AstexViewer SPICE
O 125 - 218 Jmol AstexViewer SPICE
T 125 - 218 Jmol AstexViewer SPICE
2NTS P 132 - 225 Jmol AstexViewer SPICE
2NW2 B 132 - 225 Jmol AstexViewer SPICE
2XN9 B 129 - 222 Jmol AstexViewer SPICE
2XNA B 129 - 222 Jmol AstexViewer SPICE
20 - 108 1ZGL T 137 - 225 Jmol AstexViewer SPICE