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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: NCAP_HRSVA (P03418)

Summary

This is the summary of UniProt entry NCAP_HRSVA (P03418).

Description: Nucleoprotein
Source organism: Human respiratory syncytial virus A (strain A2) (NCBI taxonomy ID 11259)
View Pfam proteome data.
Length: 391 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Pneumo_ncap 1 391
disorder n/a 389 391

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P03418. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MALSKVKLND TLNKDQLLSS SKYTIQRSTG DSIDTPNYDV QKHINKLCGM
50
51
LLITEDANHK FTGLIGMLYA MSRLGREDTI KILRDAGYHV KANGVDVTTH
100
101
RQDINGKEMK FEVLTLASLT TEIQINIEIE SRKSYKKMLK EMGEVAPEYR
150
151
HDSPDCGMII LCIAALVITK LAAGDRSGLT AVIRRANNVL KNEMKRYKGL
200
201
LPKDIANSFY EVFEKHPHFI DVFVHFGIAQ SSTRGGSRVE GIFAGLFMNA
250
251
YGAGQVMLRW GVLAKSVKNI MLGHASVQAE MEQVVEVYEY AQKLGGEAGF
300
301
YHILNNPKAS LLSLTQFPHF SSVVLGNAAG LGIMGEYRGT PRNQDLYDAA
350
351
KAYAEQLKEN GVINYSVLDL TAEELEAIKH QLNPKDNDVE L         
391
 

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Checksums:
CRC64:D06E84F4F88D382B
MD5:71c6e256fc1e2f99b69bcd054c2df19f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Pneumo_ncap 1 - 375 2YHM A 1 - 375 Jmol AstexViewer SPICE
B 1 - 375 Jmol AstexViewer SPICE
C 1 - 375 Jmol AstexViewer SPICE
D 1 - 375 Jmol AstexViewer SPICE
E 1 - 375 Jmol AstexViewer SPICE
F 1 - 375 Jmol AstexViewer SPICE
G 1 - 375 Jmol AstexViewer SPICE
H 1 - 375 Jmol AstexViewer SPICE
I 1 - 375 Jmol AstexViewer SPICE
J 1 - 375 Jmol AstexViewer SPICE
2 - 371 2WJ8 J 2 - 371 Jmol AstexViewer SPICE
2 - 374 2WJ8 O 2 - 374 Jmol AstexViewer SPICE
2 - 375 2WJ8 A 2 - 375 Jmol AstexViewer SPICE
D 2 - 375 Jmol AstexViewer SPICE
E 2 - 375 Jmol AstexViewer SPICE
I 2 - 375 Jmol AstexViewer SPICE
K 2 - 375 Jmol AstexViewer SPICE
M 2 - 375 Jmol AstexViewer SPICE
P 2 - 375 Jmol AstexViewer SPICE
Q 2 - 375 Jmol AstexViewer SPICE
T 2 - 375 Jmol AstexViewer SPICE
2 - 376 2WJ8 B 2 - 376 Jmol AstexViewer SPICE
H 2 - 376 Jmol AstexViewer SPICE
2 - 377 2WJ8 R 2 - 377 Jmol AstexViewer SPICE
2 - 378 2WJ8 C 2 - 378 Jmol AstexViewer SPICE
F 2 - 378 Jmol AstexViewer SPICE
G 2 - 378 Jmol AstexViewer SPICE
L 2 - 378 Jmol AstexViewer SPICE
2 - 379 2WJ8 N 2 - 379 Jmol AstexViewer SPICE
S 2 - 379 Jmol AstexViewer SPICE