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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: VG10_BPPH2 (P04332)

Summary

This is the summary of UniProt entry VG10_BPPH2 (P04332).

Description: Upper collar protein
Source organism: Bacillus phage phi29 (Bacteriophage phi-29) (NCBI taxonomy ID 10756)
View Pfam proteome data.
Length: 309 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Phage_connector 8 285
low_complexity n/a 134 146
disorder n/a 236 246
disorder n/a 250 252
disorder n/a 295 309

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P04332. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARKRSNTYR SINEIQRQKR NRWFIHYLNY LQSLAYQLFE WENLPPTINP
50
51
SFLEKSIHQF GYVGFYKDPV ISYIACNGAL SGQRDVYNQA TVFRAASPVY
100
101
QKEFKLYNYR DMKEEDMGVV IYNNDMAFPT TPTLELFAAE LAELKEIISV
150
151
NQNAQKTPVL IRANDNNQLS LKQVYNQYEG NAPVIFAHEA LDSDSIEVFK
200
201
TDAPYVVDKL NAQKNAVWNE MMTFLGIKNA NLEKKERMVT DEVSSNDEQI
250
251
ESSGTVFLKS REEACEKINE LYGLNVKVKF RYDIVEQMRR ELQQIENVSR
300
301
GTSDGETNE                                             
309
 

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Checksums:
CRC64:F5B01C1BE17FDE60
MD5:3abf12680f847038a8cded6d69830e7a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Phage_connector 11 - 285 1FOU A 11 - 285 Jmol AstexViewer SPICE
B 11 - 285 Jmol AstexViewer SPICE
C 11 - 285 Jmol AstexViewer SPICE
D 11 - 285 Jmol AstexViewer SPICE
E 11 - 285 Jmol AstexViewer SPICE
F 11 - 285 Jmol AstexViewer SPICE
G 11 - 285 Jmol AstexViewer SPICE
H 11 - 285 Jmol AstexViewer SPICE
I 11 - 285 Jmol AstexViewer SPICE
J 11 - 285 Jmol AstexViewer SPICE
K 11 - 285 Jmol AstexViewer SPICE
L 11 - 285 Jmol AstexViewer SPICE
1IJG A 11 - 285 Jmol AstexViewer SPICE
B 11 - 285 Jmol AstexViewer SPICE
C 11 - 285 Jmol AstexViewer SPICE
D 11 - 285 Jmol AstexViewer SPICE
E 11 - 285 Jmol AstexViewer SPICE
F 11 - 285 Jmol AstexViewer SPICE
G 11 - 285 Jmol AstexViewer SPICE
H 11 - 285 Jmol AstexViewer SPICE
I 11 - 285 Jmol AstexViewer SPICE
J 11 - 285 Jmol AstexViewer SPICE
K 11 - 285 Jmol AstexViewer SPICE
L 11 - 285 Jmol AstexViewer SPICE
1JNB A 11 - 285 Jmol AstexViewer SPICE
B 11 - 285 Jmol AstexViewer SPICE
C 11 - 285 Jmol AstexViewer SPICE
D 11 - 285 Jmol AstexViewer SPICE
E 11 - 285 Jmol AstexViewer SPICE
F 11 - 285 Jmol AstexViewer SPICE
G 11 - 285 Jmol AstexViewer SPICE
H 11 - 285 Jmol AstexViewer SPICE
I 11 - 285 Jmol AstexViewer SPICE
J 11 - 285 Jmol AstexViewer SPICE
K 11 - 285 Jmol AstexViewer SPICE
L 11 - 285 Jmol AstexViewer SPICE
16 - 284 1H5W B 16 - 284 Jmol AstexViewer SPICE
17 - 284 1H5W A 17 - 284 Jmol AstexViewer SPICE
18 - 283 1H5W C 18 - 283 Jmol AstexViewer SPICE