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7  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: HN_SV5 (P04850)

Summary

This is the summary of UniProt entry HN_SV5 (P04850).

Description: Hemagglutinin-neuraminidase EC=3.2.1.18
Source organism: Simian virus 5 (strain W3) (SV5) (NCBI taxonomy ID 11208)
View Pfam proteome data.
Length: 565 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A HN 11 565
transmembrane n/a 14 36
disorder n/a 431 438
disorder n/a 440 445
low_complexity n/a 507 519

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P04850. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVAEDAPVRA TCRVLFRTTT LIFLCTLLAL SISILYESLI TQKQIMSQAG
50
51
STGSNSGLGS ITDLLNNILS VANQIIYNSA VALPLQLDTL ESTLLTAIKS
100
101
LQTSDKLEQN CSWSAALIND NRYINGINQF YFSIAEGRNL TLGPLLNMPS
150
151
FIPTATTPEG CTRIPSFSLT KTHWCYTHNV ILNGCQDHVS SNQFVSMGII
200
201
EPTSAGFPFF RTLKTLYLSD GVNRKSCSIS TVPGGCMMYC FVSTQPERDD
250
251
YFSAAPPEQR IIIMYYNDTI VERIINPPGV LDVWATLNPG TGSGVYYLGW
300
301
VLFPIYGGVI KGTSLWNNQA NKYFIPQMVA ALCSQNQATQ VQNAKSSYYS
350
351
SWFGNRMIQS GILACPLRQD LTNECLVLPF SNDQVLMGAE GRLYMYGDSV
400
401
YYYQRSNSWW PMTMLYKVTI TFTNGQPSAI SAQNVPTQQV PRPGTGDCSA
450
451
TNRCPGFCLT GVYADAWLLT NPSSTSTFGS EATFTGSYLN TATQRINPTM
500
501
YIANNTQIIS SQQFGSSGQE AAYGHTTCFR DTGSVMVYCI YIIELSSSLL
550
551
GQFQIVPFIR QVTLS                                      
565
 

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Checksums:
CRC64:30A4A7068A25B563
MD5:66ef87d83915b4d76dd107601842a2ce

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
HN 118 - 565 1Z4V A 118 - 565 Jmol AstexViewer SPICE
1Z4W A 118 - 565 Jmol AstexViewer SPICE
1Z4X A 118 - 565 Jmol AstexViewer SPICE
1Z4Y A 118 - 565 Jmol AstexViewer SPICE
1Z4Z A 118 - 565 Jmol AstexViewer SPICE
1Z50 A 118 - 565 Jmol AstexViewer SPICE
56 - 102 3TSI A 56 - 102 Jmol AstexViewer SPICE
C 56 - 102 Jmol AstexViewer SPICE
56 - 103 3TSI B 56 - 103 Jmol AstexViewer SPICE
58 - 108 3TSI D 58 - 108 Jmol AstexViewer SPICE