Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: RLA1_YEAST (P05318)

Summary

This is the summary of UniProt entry RLA1_YEAST (P05318).

Description: 60S acidic ribosomal protein P1-alpha
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 106 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_60s 20 105
low_complexity n/a 63 95
disorder n/a 73 101

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P05318. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSTESALSYA ALILADSEIE ISSEKLLTLT NAANVPVENI WADIFAKALD
50
51
GQNLKDLLVN FSAGAAAPAG VAGGVAGGEA GEAEAEKEEE EAKEESDDDM
100
101
GFGLFD                                                
106
 

Show the unformatted sequence.

Checksums:
CRC64:9A2FE94D28640ACC
MD5:58179e81cc474bb95ad6b4a1333c461f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_60s 20 - 62 3IZS t 20 - 62 Jmol AstexViewer SPICE
u 20 - 62 Jmol AstexViewer SPICE