Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RS3_YEAST (P05750)

Summary

This is the summary of UniProt entry RS3_YEAST (P05750).

Description: 40S ribosomal protein S3
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 240 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A KH_2 20 96
Pfam A Ribosomal_S3_C 104 188
disorder n/a 200 206
disorder n/a 219 240

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P05750. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVALISKKRK LVADGVFYAE LNEFFTRELA EEGYSGVEVR VTPTKTEVII
50
51
RATRTQDVLG ENGRRINELT LLVQKRFKYA PGTIVLYAER VQDRGLSAVA
100
101
QAESMKFKLL NGLAIRRAAY GVVRYVMESG AKGCEVVVSG KLRAARAKAM
150
151
KFADGFLIHS GQPVNDFIDT ATRHVLMRQG VLGIKVKIMR DPAKSRTGPK
200
201
ALPDAVTIIE PKEEEPILAP SVKDYRPAEE TEAQAEPVEA           
240
 

Show the unformatted sequence.

Checksums:
CRC64:B85C0DFEB011745F
MD5:ba599fcaa91ac3b6a29818b9d3e78069

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
KH_2 20 - 96 1S1H C 19 - 95 Jmol AstexViewer SPICE
3IZB B 20 - 96 Jmol AstexViewer SPICE
3O2Z C 20 - 96 Jmol AstexViewer SPICE
3O30 C 20 - 96 Jmol AstexViewer SPICE
3U5C D 20 - 96 Jmol AstexViewer SPICE
3U5G D 20 - 96 Jmol AstexViewer SPICE
Ribosomal_S3_C 104 - 188 1S1H C 103 - 187 Jmol AstexViewer SPICE
3IZB B 104 - 188 Jmol AstexViewer SPICE
3O2Z C 104 - 188 Jmol AstexViewer SPICE
3O30 C 104 - 188 Jmol AstexViewer SPICE
3U5C D 104 - 188 Jmol AstexViewer SPICE
3U5G D 104 - 188 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.