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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DDLA_SALTY (P0A1F0)

Summary

This is the summary of UniProt entry DDLA_SALTY (P0A1F0).

Description: D-alanine--D-alanine ligase A EC=6.3.2.4
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (NCBI taxonomy ID 99287)
View Pfam proteome data.
Length: 364 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Dala_Dala_lig_N 4 130
disorder n/a 54 55
disorder n/a 86 90
Pfam A Dala_Dala_lig_C 147 348

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0A1F0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAKLRVGIVF GGKSAEHEVS LQSAKNIVDA IDKTRFDVVL LGIDKAGQWH
50
51
VNDAENYLQN ADDPAHIALR PSAISLAQVP GKHQHQLINA QNGQPLPTVD
100
101
VIFPIVHGTL GEDGSLQGML RVANLPFVGS DVLSSAACMD KDVAKRLLRD
150
151
AGLNIAPFIT LTRTNRHAFS FAEVESRLGL PLFVKPANQG SSVGVSKVAN
200
201
EAQYQQAVAL AFEFDHKVVV EQGIKGREIE CAVLGNDNPQ ASTCGEIVLN
250
251
SEFYAYDTKY IDDNGAQVVV PAQIPSEVND KIRAIAIQAY QTLGCAGMAR
300
301
VDVFLTADNE VVINEINTLP GFTNISMYPK LWQASGLGYT DLISRLIELA
350
351
LERHTANNAL KTTM                                       
364
 

Show the unformatted sequence.

Checksums:
CRC64:00AB43A06746E276
MD5:02672be8b1e9abe30a038a21c7e0cc34

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Dala_Dala_lig_C 147 - 348 3I12 A 147 - 348 Jmol AstexViewer SPICE
B 147 - 348 Jmol AstexViewer SPICE
C 147 - 348 Jmol AstexViewer SPICE
D 147 - 348 Jmol AstexViewer SPICE
3Q1K A 147 - 348 Jmol AstexViewer SPICE
B 147 - 348 Jmol AstexViewer SPICE
C 147 - 348 Jmol AstexViewer SPICE
D 147 - 348 Jmol AstexViewer SPICE
Dala_Dala_lig_N 4 - 130 3I12 A 4 - 130 Jmol AstexViewer SPICE
B 4 - 130 Jmol AstexViewer SPICE
C 4 - 130 Jmol AstexViewer SPICE
D 4 - 130 Jmol AstexViewer SPICE
3Q1K A 4 - 130 Jmol AstexViewer SPICE
B 4 - 130 Jmol AstexViewer SPICE
C 4 - 130 Jmol AstexViewer SPICE
D 4 - 130 Jmol AstexViewer SPICE