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17  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL1_ECOLI (P0A7L0)

Summary

This is the summary of UniProt entry RL1_ECOLI (P0A7L0).

Description: 50S ribosomal protein L1
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 234 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L1 9 221
disorder n/a 59 65
low_complexity n/a 81 93
disorder n/a 136 149
disorder n/a 156 157
low_complexity n/a 184 200

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0A7L0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAKLTKRMRV IREKVDATKQ YDINEAIALL KELATAKFVE SVDVAVNLGI
50
51
DARKSDQNVR GATVLPHGTG RSVRVAVFTQ GANAEAAKAA GAELVGMEDL
100
101
ADQIKKGEMN FDVVIASPDA MRVVGQLGQV LGPRGLMPNP KVGTVTPNVA
150
151
EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF DADKLKENLE ALLVALKKAK
200
201
PTQAKGVYIK KVSISTTMGA GVAVDQAGLS ASVN                 
234
 

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Checksums:
CRC64:D751704B34748D53
MD5:aa221aaeffc9e9506e602943921ef46a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L1 13 - 145 487D H 12 - 145 Jmol AstexViewer SPICE
131 - 135 3E1B Z 128 - 132 Jmol AstexViewer SPICE
3E1D Z 128 - 132 Jmol AstexViewer SPICE
9 - 221 2GYA 2 8 - 220 Jmol AstexViewer SPICE
2GYC 2 8 - 220 Jmol AstexViewer SPICE
2WWQ 5 9 - 221 Jmol AstexViewer SPICE
3FIK 5 9 - 221 Jmol AstexViewer SPICE
3IZT C 9 - 221 Jmol AstexViewer SPICE
3IZU C 9 - 221 Jmol AstexViewer SPICE
3J01 5 9 - 221 Jmol AstexViewer SPICE
3J0T C 9 - 221 Jmol AstexViewer SPICE
3J0W C 9 - 221 Jmol AstexViewer SPICE
3J0Y C 9 - 221 Jmol AstexViewer SPICE
3J11 C 9 - 221 Jmol AstexViewer SPICE
3J12 C 9 - 221 Jmol AstexViewer SPICE
3J14 C 9 - 221 Jmol AstexViewer SPICE
3KCR 5 9 - 221 Jmol AstexViewer SPICE