Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
63  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL20_ECOLI (P0A7L3)

Summary

This is the summary of UniProt entry RL20_ECOLI (P0A7L3).

Description: 50S ribosomal protein L20
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 118 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L20 2 109
low_complexity n/a 48 59

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0A7L3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARVKRGVIA RARHKKILKQ AKGYYGARSR VYRVAFQAVI KAGQYAYRDR
50
51
RQRKRQFRQL WIARINAAAR QNGISYSKFI NGLKKASVEI DRKILADIAV
100
101
FDKVAFTALV EKAKAALA                                   
118
 

Show the unformatted sequence.

Checksums:
CRC64:E60AFDBB6F05DFB3
MD5:fde9fa85e2bb35caa2b2d6f368888a0a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L20 2 - 109 1VS6 Q 1 - 108 Jmol AstexViewer SPICE
1VS8 Q 1 - 108 Jmol AstexViewer SPICE
1VT2 Q 1 - 108 Jmol AstexViewer SPICE
2AW4 Q 1 - 108 Jmol AstexViewer SPICE
2AWB Q 1 - 108 Jmol AstexViewer SPICE
2I2T Q 1 - 108 Jmol AstexViewer SPICE
2I2V Q 1 - 108 Jmol AstexViewer SPICE
2J28 Q 1 - 108 Jmol AstexViewer SPICE
2QAM Q 1 - 108 Jmol AstexViewer SPICE
2QAO Q 1 - 108 Jmol AstexViewer SPICE
2QBA Q 1 - 108 Jmol AstexViewer SPICE
2QBC Q 1 - 108 Jmol AstexViewer SPICE
2QBE Q 1 - 108 Jmol AstexViewer SPICE
2QBG Q 1 - 108 Jmol AstexViewer SPICE
2QBI Q 1 - 108 Jmol AstexViewer SPICE
2QBK Q 1 - 108 Jmol AstexViewer SPICE
2QOV Q 1 - 108 Jmol AstexViewer SPICE
2QOX Q 1 - 108 Jmol AstexViewer SPICE
2QOZ Q 1 - 108 Jmol AstexViewer SPICE
2QP1 Q 1 - 108 Jmol AstexViewer SPICE
2VHM Q 1 - 108 Jmol AstexViewer SPICE
2VHN Q 1 - 108 Jmol AstexViewer SPICE
2WWQ Q 1 - 108 Jmol AstexViewer SPICE
2Z4L Q 1 - 108 Jmol AstexViewer SPICE
2Z4N Q 1 - 108 Jmol AstexViewer SPICE
3BBX Q 1 - 108 Jmol AstexViewer SPICE
3DF2 Q 1 - 108 Jmol AstexViewer SPICE
3DF4 Q 1 - 108 Jmol AstexViewer SPICE
3E1B J 1 - 108 Jmol AstexViewer SPICE
3E1D J 1 - 108 Jmol AstexViewer SPICE
3FIK Q 1 - 108 Jmol AstexViewer SPICE
3I1N Q 1 - 108 Jmol AstexViewer SPICE
3I1P Q 1 - 108 Jmol AstexViewer SPICE
3I1R Q 1 - 108 Jmol AstexViewer SPICE
3I1T Q 1 - 108 Jmol AstexViewer SPICE
3I20 Q 1 - 108 Jmol AstexViewer SPICE
3I22 Q 1 - 108 Jmol AstexViewer SPICE
3IZT R 1 - 108 Jmol AstexViewer SPICE
3IZU R 1 - 108 Jmol AstexViewer SPICE
3J01 Q 1 - 108 Jmol AstexViewer SPICE
3J0T S 1 - 108 Jmol AstexViewer SPICE
3J0W S 1 - 108 Jmol AstexViewer SPICE
3J0Y S 1 - 108 Jmol AstexViewer SPICE
3J11 S 1 - 108 Jmol AstexViewer SPICE
3J12 S 1 - 108 Jmol AstexViewer SPICE
3J14 S 1 - 108 Jmol AstexViewer SPICE
3J19 Q 1 - 108 Jmol AstexViewer SPICE
3KCR Q 1 - 108 Jmol AstexViewer SPICE
3OAS Q 1 - 108 Jmol AstexViewer SPICE
3OAT Q 1 - 108 Jmol AstexViewer SPICE
3OFC Q 1 - 108 Jmol AstexViewer SPICE
3OFD Q 1 - 108 Jmol AstexViewer SPICE
3OFQ Q 1 - 108 Jmol AstexViewer SPICE
3OFR Q 1 - 108 Jmol AstexViewer SPICE
3OFZ Q 1 - 108 Jmol AstexViewer SPICE
3OG0 Q 1 - 108 Jmol AstexViewer SPICE
3ORB Q 1 - 108 Jmol AstexViewer SPICE
3R8S Q 1 - 108 Jmol AstexViewer SPICE
3R8T Q 1 - 108 Jmol AstexViewer SPICE
3SGF U 1 - 108 Jmol AstexViewer SPICE
3UOS U 1 - 108 Jmol AstexViewer SPICE
3 - 109 2GYA O 2 - 108 Jmol AstexViewer SPICE
2GYC O 2 - 108 Jmol AstexViewer SPICE