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61  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL13_ECOLI (P0AA10)

Summary

This is the summary of UniProt entry RL13_ECOLI (P0AA10).

Description: 50S ribosomal protein L13
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 142 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L13 15 142
disorder n/a 39 41
disorder n/a 135 140

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0AA10. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKTFTAKPET VKRDWYVVDA TGKTLGRLAT ELARRLRGKH KAEYTPHVDT
50
51
GDYIIVLNAD KVAVTGNKRT DKVYYHHTGH IGGIKQATFE EMIARRPERV
100
101
IEIAVKGMLP KGPLGRAMFR KLKVYAGNEH NHAAQQPQVL DI        
142
 

Show the unformatted sequence.

Checksums:
CRC64:58B45EF9EB75FDCD
MD5:33e7dc7d11d7b539319895ea6c933e23

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L13 15 - 140 1VS6 J 15 - 140 Jmol AstexViewer SPICE
1VS8 J 15 - 140 Jmol AstexViewer SPICE
2AW4 J 15 - 140 Jmol AstexViewer SPICE
2AWB J 15 - 140 Jmol AstexViewer SPICE
2J28 J 15 - 140 Jmol AstexViewer SPICE
3BBX J 15 - 140 Jmol AstexViewer SPICE
3E1B 6 15 - 140 Jmol AstexViewer SPICE
3E1D 6 15 - 140 Jmol AstexViewer SPICE
15 - 142 1VT2 J 15 - 142 Jmol AstexViewer SPICE
2GYA H 15 - 142 Jmol AstexViewer SPICE
2GYC H 15 - 142 Jmol AstexViewer SPICE
2I2T J 15 - 142 Jmol AstexViewer SPICE
2I2V J 15 - 142 Jmol AstexViewer SPICE
2QAM J 15 - 142 Jmol AstexViewer SPICE
2QAO J 15 - 142 Jmol AstexViewer SPICE
2QBA J 15 - 142 Jmol AstexViewer SPICE
2QBC J 15 - 142 Jmol AstexViewer SPICE
2QBE J 15 - 142 Jmol AstexViewer SPICE
2QBG J 15 - 142 Jmol AstexViewer SPICE
2QBI J 15 - 142 Jmol AstexViewer SPICE
2QBK J 15 - 142 Jmol AstexViewer SPICE
2QOV J 15 - 142 Jmol AstexViewer SPICE
2QOX J 15 - 142 Jmol AstexViewer SPICE
2QOZ J 15 - 142 Jmol AstexViewer SPICE
2QP1 J 15 - 142 Jmol AstexViewer SPICE
2WWQ J 15 - 142 Jmol AstexViewer SPICE
2Z4L J 15 - 142 Jmol AstexViewer SPICE
2Z4N J 15 - 142 Jmol AstexViewer SPICE
3DF2 J 15 - 142 Jmol AstexViewer SPICE
3DF4 J 15 - 142 Jmol AstexViewer SPICE
3FIK J 15 - 142 Jmol AstexViewer SPICE
3I1N J 15 - 142 Jmol AstexViewer SPICE
3I1P J 15 - 142 Jmol AstexViewer SPICE
3I1R J 15 - 142 Jmol AstexViewer SPICE
3I1T J 15 - 142 Jmol AstexViewer SPICE
3I20 J 15 - 142 Jmol AstexViewer SPICE
3I22 J 15 - 142 Jmol AstexViewer SPICE
3IZT K 15 - 142 Jmol AstexViewer SPICE
3IZU K 15 - 142 Jmol AstexViewer SPICE
3J01 J 15 - 142 Jmol AstexViewer SPICE
3J0T L 15 - 142 Jmol AstexViewer SPICE
3J0W L 15 - 142 Jmol AstexViewer SPICE
3J0Y L 15 - 142 Jmol AstexViewer SPICE
3J11 L 15 - 142 Jmol AstexViewer SPICE
3J12 L 15 - 142 Jmol AstexViewer SPICE
3J14 L 15 - 142 Jmol AstexViewer SPICE
3J19 J 15 - 142 Jmol AstexViewer SPICE
3KCR J 15 - 142 Jmol AstexViewer SPICE
3OAS J 15 - 142 Jmol AstexViewer SPICE
3OAT J 15 - 142 Jmol AstexViewer SPICE
3OFC J 15 - 142 Jmol AstexViewer SPICE
3OFD J 15 - 142 Jmol AstexViewer SPICE
3OFQ J 15 - 142 Jmol AstexViewer SPICE
3OFR J 15 - 142 Jmol AstexViewer SPICE
3OFZ J 15 - 142 Jmol AstexViewer SPICE
3OG0 J 15 - 142 Jmol AstexViewer SPICE
3ORB J 15 - 142 Jmol AstexViewer SPICE
3R8S J 15 - 142 Jmol AstexViewer SPICE
3R8T J 15 - 142 Jmol AstexViewer SPICE
3SGF N 15 - 142 Jmol AstexViewer SPICE
3UOS N 15 - 142 Jmol AstexViewer SPICE