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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: ATPA_ECOLI (P0ABB0)

Summary

This is the summary of UniProt entry ATPA_ECOLI (P0ABB0).

Description: ATP synthase subunit alpha EC=3.6.3.14
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 513 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A HAS-barrel 25 109
low_complexity n/a 95 112
Pfam A ATP-synt_ab 148 375
Pfam A ATP-synt_ab_C 387 488
disorder n/a 486 488

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0ABB0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGVIR IHGLADCMQG
50
51
EMISLPGNRY AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG
100
101
RGLLGRVVNT LGAPIDGKGP LDHDGFSAVE AIAPGVIERQ SVDQPVQTGY
150
151
KAVDSMIPIG RGQRELIIGD RQTGKTALAI DAIINQRDSG IKCIYVAIGQ
200
201
KASTISNVVR KLEEHGALAN TIVVVATASE SAALQYLAPY AGCAMGEYFR
250
251
DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAFPGDV FYLHSRLLER
300
301
AARVNAEYVE AFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD
350
351
GQIFLETNLF NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY
400
401
RELAAFSQFA SDLDDATRKQ LDHGQKVTEL LKQKQYAPMS VAQQSLVLFA
450
451
AERGYLADVE LSKIGSFEAA LLAYVDRDHA PLMQEINQTG GYNDEIEGKL
500
501
KGILDSFKAT QSW                                        
513
 

Show the unformatted sequence.

Checksums:
CRC64:DD1F3859375E9103
MD5:5eedc69dcc8a494aac3431061697c90c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
ATP-synt_ab 148 - 375 3OAA A 148 - 375 Jmol AstexViewer SPICE
a 148 - 375 Jmol AstexViewer SPICE
B 148 - 375 Jmol AstexViewer SPICE
C 148 - 375 Jmol AstexViewer SPICE
I 148 - 375 Jmol AstexViewer SPICE
J 148 - 375 Jmol AstexViewer SPICE
K 148 - 375 Jmol AstexViewer SPICE
Q 148 - 375 Jmol AstexViewer SPICE
R 148 - 375 Jmol AstexViewer SPICE
S 148 - 375 Jmol AstexViewer SPICE
Y 148 - 375 Jmol AstexViewer SPICE
Z 148 - 375 Jmol AstexViewer SPICE
ATP-synt_ab_C 387 - 488 3OAA A 387 - 488 Jmol AstexViewer SPICE
a 387 - 488 Jmol AstexViewer SPICE
B 387 - 488 Jmol AstexViewer SPICE
C 387 - 488 Jmol AstexViewer SPICE
I 387 - 488 Jmol AstexViewer SPICE
J 387 - 488 Jmol AstexViewer SPICE
K 387 - 488 Jmol AstexViewer SPICE
Q 387 - 488 Jmol AstexViewer SPICE
R 387 - 488 Jmol AstexViewer SPICE
S 387 - 488 Jmol AstexViewer SPICE
Y 387 - 488 Jmol AstexViewer SPICE
Z 387 - 488 Jmol AstexViewer SPICE
HAS-barrel 25 - 109 3OAA A 25 - 109 Jmol AstexViewer SPICE
a 25 - 109 Jmol AstexViewer SPICE
C 25 - 109 Jmol AstexViewer SPICE
I 25 - 109 Jmol AstexViewer SPICE
K 25 - 109 Jmol AstexViewer SPICE
Q 25 - 109 Jmol AstexViewer SPICE
S 25 - 109 Jmol AstexViewer SPICE
Y 25 - 109 Jmol AstexViewer SPICE
26 - 109 3OAA B 26 - 109 Jmol AstexViewer SPICE
J 26 - 109 Jmol AstexViewer SPICE
R 26 - 109 Jmol AstexViewer SPICE
Z 26 - 109 Jmol AstexViewer SPICE