Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: PPID_ECOLI (P0ADY1)

Summary

This is the summary of UniProt entry PPID_ECOLI (P0ADY1).

Description: Peptidyl-prolyl cis-trans isomerase D EC=5.2.1.8
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 623 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A SurA_N_3 1 166
low_complexity n/a 11 26
transmembrane n/a 12 35
disorder n/a 56 58
disorder n/a 61 62
disorder n/a 70 71
disorder n/a 217 219
Pfam A Rotamase_2 247 369
disorder n/a 249 251
disorder n/a 254 259
disorder n/a 267 274
disorder n/a 318 320
disorder n/a 396 407
disorder n/a 476 477
disorder n/a 479 483
coiled_coil n/a 479 499
disorder n/a 487 494
disorder n/a 524 533
disorder n/a 543 545
disorder n/a 555 558
disorder n/a 580 589

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0ADY1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MMDSLRTAAN SLVLKIIFGI IIVSFILTGV SGYLIGGGNN YAAKVNDQEI
50
51
SRGQFENAFN SERNRMQQQL GDQYSELAAN EGYMKTLRQQ VLNRLIDEAL
100
101
LDQYARELKL GISDEQVKQA IFATPAFQVD GKFDNSRYNG ILNQMGMTAD
150
151
QYAQALRNQL TTQQLINGVA GTDFMLKGET DELAALVAQQ RVVREATIDV
200
201
NALAAKQPVT EQEIASYYEQ NKNNFMTPEQ FRVSYIKLDA ATMQQPVSDA
250
251
DIQSYYDQHQ DQFTQPQRTR YSIIQTKTED EAKAVLDELN KGGDFAALAK
300
301
EKSADIISAR NGGDMGWLED ATIPDELKNA GLKEKGQLSG VIKSSVGFLI
350
351
VRLDDIQPAK VKSLDEVRDD IAAKVKHEKA LDAYYALQQK VSDAASNDTE
400
401
SLAGAEQAAG VKATQTGWFS KDNLPEELNF KPVADAIFNG GLVGENGAPG
450
451
INSDIITVDG DRAFVLRISE HKPEAVKPLA DVQEQVKALV QHNKAEQQAK
500
501
VDAEKLLVDL KAGKGAEAMQ AAGLKFGEPK TLSRSGRDPI SQAAFALPLP
550
551
AKDKPSYGMA TDMQGNVVLL ALDEVKQGSM PEDQKKAMVQ GITQNNAQIV
600
601
FEALMSNLRK EAKIKIGDAL EQQ                             
623
 

Show the unformatted sequence.

Checksums:
CRC64:0F646F687114A387
MD5:6107950a8bfdc532059d2b072baf9356

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Rotamase_2 264 - 357 2KGJ A 1 - 94 Jmol AstexViewer SPICE