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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PPIA_ECOLI (P0AFL3)

Summary

This is the summary of UniProt entry PPIA_ECOLI (P0AFL3).

Description: Peptidyl-prolyl cis-trans isomerase A EC=5.2.1.8
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 190 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 24
low_complexity n/a 4 25
Pfam A Pro_isomerase 30 188
disorder n/a 84 116
disorder n/a 167 171

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0AFL3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MFKSTLAAMA AVFALSALSP AAMAAKGDPH VLLTTSAGNI ELELDKQKAP
50
51
VSVQNFVDYV NSGFYNNTTF HRVIPGFMIQ GGGFTEQMQQ KKPNPPIKNE
100
101
ADNGLRNTRG TIAMARTADK DSATSQFFIN VADNAFLDHG QRDFGYAVFG
150
151
KVVKGMDVAD KISQVPTHDV GPYQNVPSKP VVILSAKVLP           
190
 

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Checksums:
CRC64:8B48535F36AA61A2
MD5:6ed557e63f9430a407a0ba7bc8dff3e8

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Pro_isomerase 30 - 188 1CLH A 6 - 164 Jmol AstexViewer SPICE
1J2A A 6 - 164 Jmol AstexViewer SPICE
1V9T A 6 - 164 Jmol AstexViewer SPICE
B 6 - 164 Jmol AstexViewer SPICE
1VAI A 6 - 164 Jmol AstexViewer SPICE
B 6 - 164 Jmol AstexViewer SPICE