Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBL_ORYSJ (P0C512)

Summary

This is the summary of UniProt entry RBL_ORYSJ (P0C512).

Description: Ribulose bisphosphate carboxylase large chain EC=4.1.1.39
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 477 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RuBisCO_large_N 21 146
disorder n/a 40 41
low_complexity n/a 46 60
disorder n/a 50 57
Pfam A RuBisCO_large 154 462

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0C512. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSPQTETKAS VGFKAGVKDY KLTYYTPEYE TKDTDILAAF RVTPQPGVPP
50
51
EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYHIEPV VGEDNQYIAY
100
101
VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPTYSKTFQG
150
151
PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRACY ECLRGGLDFT
200
201
KDDENVNSQP FMRWRDRFVF CAEAIYKSQA ETGEIKGHYL NATAGTCEEM
250
251
IKRAVFAREL GVPIVMHDYL TGGFTANTSL AHYCRDNGLL LHIHRAMHAV
300
301
IDRQKNHGMH FRVLAKALRM SGGDHIHAGT VVGKLEGERE MTLGFVDLLR
350
351
DDFIEKDRAR GIFFTQDWVS MPGVIPVASG GIHVWHMPAL TEIFGDDSVL
400
401
QFGGGTLGHP WGNAPGAAAN RVALEACVQA RNEGRDLARE GNEIIRSACK
450
451
WSPELAAACE IWKAIKFEFE PVDKLDS                         
477
 

Show the unformatted sequence.

Checksums:
CRC64:8EECF4F8F1F0A8F9
MD5:43481f80d515d1ca8e8b8d11f257cf53

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RuBisCO_large 154 - 462 1WDD A 154 - 462 Jmol AstexViewer SPICE
E 154 - 462 Jmol AstexViewer SPICE
3AXK A 154 - 462 Jmol AstexViewer SPICE
B 154 - 462 Jmol AstexViewer SPICE
3AXM A 154 - 462 Jmol AstexViewer SPICE
B 154 - 462 Jmol AstexViewer SPICE
C 154 - 462 Jmol AstexViewer SPICE
D 154 - 462 Jmol AstexViewer SPICE
E 154 - 462 Jmol AstexViewer SPICE
F 154 - 462 Jmol AstexViewer SPICE
G 154 - 462 Jmol AstexViewer SPICE
H 154 - 462 Jmol AstexViewer SPICE
RuBisCO_large_N 21 - 146 1WDD A 21 - 146 Jmol AstexViewer SPICE
E 21 - 146 Jmol AstexViewer SPICE
3AXK A 21 - 146 Jmol AstexViewer SPICE
B 21 - 146 Jmol AstexViewer SPICE
3AXM B 21 - 146 Jmol AstexViewer SPICE
D 21 - 146 Jmol AstexViewer SPICE
F 21 - 146 Jmol AstexViewer SPICE
H 21 - 146 Jmol AstexViewer SPICE
22 - 146 3AXM C 22 - 146 Jmol AstexViewer SPICE
E 22 - 146 Jmol AstexViewer SPICE
G 22 - 146 Jmol AstexViewer SPICE
23 - 146 3AXM A 23 - 146 Jmol AstexViewer SPICE