Summary
This is the summary of UniProt entry NANH_VIBCH (P0C6E9).
| Description: | Sialidase EC=3.2.1.18 |
| Source organism: |
Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
(NCBI taxonomy ID
243277)
View Pfam proteome data. |
| Length: | 781 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| sig_p | n/a | 1 | 24 |
| disorder | n/a | 40 | 45 |
| disorder | n/a | 48 | 54 |
| Pfam A | Sial-lect-inser | 64 | 221 |
| disorder | n/a | 188 | 192 |
| disorder | n/a | 252 | 260 |
| disorder | n/a | 289 | 291 |
| disorder | n/a | 317 | 319 |
| Pfam A | Sial-lect-inser | 347 | 543 |
| disorder | n/a | 538 | 542 |
| disorder | n/a | 550 | 557 |
| disorder | n/a | 699 | 703 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession P0C6E9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MRFKNVKKTA LMLAMFGMAT SSNAALFDYN ATGDTEFDSP AKQGWMQDNT
50 51
NNGSGVLTNA DGMPAWLVQG IGGRAQWTYS LSTNQHAQAS SFGWRMTTEM
100 101
KVLSGGMITN YYANGTQRVL PIISLDSSGN LVVEFEGQTG RTVLATGTAA
150 151
TEYHKFELVF LPGSNPSASF YFDGKLIRDN IQPTASKQNM IVWGNGSSNT
200 201
DGVAAYRDIK FEIQGDVIFR GPDRIPSIVA SSVTPGVVTA FAEKRVGGGD
250 251
PGALSNTNDI ITRTSRDGGI TWDTELNLTE QINVSDEFDF SDPRPIYDPS
300 301
SNTVLVSYAR WPTDAAQNGD RIKPWMPNGI FYSVYDVASG NWQAPIDVTD
350 351
QVKERSFQIA GWGGSELYRR NTSLNSQQDW QSNAKIRIVD GAANQIQVAD
400 401
GSRKYVVTLS IDESGGLVAN LNGVSAPIIL QSEHAKVHSF HDYELQYSAL
450 451
NHTTTLFVDG QQITTWAGEV SQENNIQFGN ADAQIDGRLH VQKIVLTQQG
500 501
HNLVEFDAFY LAQQTPEVEK DLEKLGWTKI KTGNTMSLYG NASVNPGPGH
550 551
GITLTRQQNI SGSQNGRLIY PAIVLDRFFL NVMSIYSDDG GSNWQTGSTL
600 601
PIPFRWKSSS ILETLEPSEA DMVELQNGDL LLTARLDFNQ IVNGVNYSPR
650 651
QQFLSKDGGI TWSLLEANNA NVFSNISTGT VDASITRFEQ SDGSHFLLFT
700 701
NPQGNPAGTN GRQNLGLWFS FDEGVTWKGP IQLVNGASAY SDIYQLDSEN
750 751
AIVIVETDNS NMRILRMPIT LLKQKLTLSQ N
781
Show the unformatted sequence. |
| Checksums: |
CRC64:FA85ED907FB20AF0
MD5:26d4d136c699b1d86d62900078190592
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Sial-lect-inser | 347 - 543 | 1KIT | A | 347 - 543 | Jmol AstexViewer SPICE |
| 64 - 215 | 2W68 | C | 64 - 215 | Jmol AstexViewer SPICE | |
| 64 - 216 | 2W68 | A | 64 - 216 | Jmol AstexViewer SPICE | |
| B | 64 - 216 | Jmol AstexViewer SPICE | |||
| 64 - 221 | 1KIT | A | 64 - 221 | Jmol AstexViewer SPICE |