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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: UBB_BOVIN (P0CG53)

Summary

This is the summary of UniProt entry UBB_BOVIN (P0CG53).

Description: Polyubiquitin-B
Source organism: Bos taurus (Bovine)
Length: 305 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A ubiquitin 6 74
disorder n/a 26 32
disorder n/a 41 44
Pfam A ubiquitin 82 150
disorder n/a 102 108
disorder n/a 117 120
Pfam A ubiquitin 158 226
disorder n/a 178 184
disorder n/a 193 196
Pfam A ubiquitin 234 302
disorder n/a 254 260
disorder n/a 269 270

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0CG53. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL
50
51
EDGRTLSDYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE
100
101
NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLSDYNIQKE STLHLVLRLR
150
151
GGMQIFVKTL TGKTITLEVE PSDTIENVKA KIQDKEGIPP DQQRLIFAGK
200
201
QLEDGRTLSD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVEPSDT
250
251
IENVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLSDYNIQ KESTLHLVLR
300
301
LRGGC                                                 
305
 

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Checksums:
CRC64:1E6C7878AE958E68
MD5:6d3a1abb7ddf5b72a95a518def1bf570

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
ubiquitin 6 - 74 2XBB C 6 - 74 Jmol AstexViewer SPICE
D 6 - 74 Jmol AstexViewer SPICE