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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: ISOA_PSEAY (P10342)

Summary

This is the summary of UniProt entry ISOA_PSEAY (P10342).

Description: Isoamylase EC=3.2.1.68
Source organism: Pseudomonas amyloderamosa (NCBI taxonomy ID 32043)
Length: 776 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 26
low_complexity n/a 7 19
Pfam A CBM_48 32 148
disorder n/a 129 130
disorder n/a 148 149
disorder n/a 153 160
disorder n/a 162 168
disorder n/a 190 203
Pfam A Alpha-amylase 228 613
disorder n/a 256 265
disorder n/a 555 558
disorder n/a 568 569
disorder n/a 579 582

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P10342. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKCPKILAAL LGCAVLAGVP AMPAHAAINS MSLGASYDAQ QANITFRVYS
50
51
SQATRIVLYL YSAGYGVQES ATYTLSPAGS GVWAVTVPVS SIKAAGITGA
100
101
VYYGYRAWGP NWPYASNWGK GSQAGFVSDV DANGDRFNPN KLLLDPYAQE
150
151
VSQDPLNPSN QNGNVFASGA SYRTTDSGIY APKGVVLVPS TQSTGTKPTR
200
201
AQKDDVIYEV HVRGFTEQDT SIPAQYRGTY YGAGLKASYL ASLGVTAVEF
250
251
LPVQETQNDA NDVVPNSDAN QNYWGYMTEN YFSPDRRYAY NKAAGGPTAE
300
301
FQAMVQAFHN AGIKVYMDVV YNHTAEGGTW TSSDPTTATI YSWRGLDNAT
350
351
YYELTSGNQY FYDNTGIGAN FNTYNTVAQN LIVDSLAYWA NTMGVDGFRF
400
401
DLASVLGNSC LNGAYTASAP NCPNGGYNFD AADSNVAINR ILREFTVRPA
450
451
AGGSGLDLFA EPWAIGGNSY QLGGFPQGWS EWNGLFRDSL RQAQNELGSM
500
501
TIYVTQDAND FSGSSNLFQS SGRSPWNSIN FIDVHDGMTL KDVYSCNGAN
550
551
NSQAWPYGPS DGGTSTNYSW DQGMSAGTGA AVDQRRAART GMAFEMLSAG
600
601
TPLMQGGDEY LRTLQCNNNA YNLDSSANWL TYSWTTDQSN FYTFAQRLIA
650
651
FRKAHPALRP SSWYSGSQLT WYQPSGAVAD SNYWNNTSNY AIAYAINGPS
700
701
LGDSNSIYVA YNGWSSSVTF TLPAPPSGTQ WYRVTDTCDW NDGASTFVAP
750
751
GSETLIGGAG TTYGQCGQSL LLLISK                          
776
 

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Checksums:
CRC64:F738BF8040246169
MD5:050dc4ba84824e4b6fcd75d90005df63

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Alpha-amylase 228 - 613 1BF2 A 202 - 587 Jmol AstexViewer SPICE
CBM_48 32 - 148 1BF2 A 6 - 122 Jmol AstexViewer SPICE