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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL4A_YEAST (P10664)

Summary

This is the summary of UniProt entry RL4A_YEAST (P10664).

Description: 60S ribosomal protein L4-A
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 362 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 14
Pfam A Ribosomal_L4 20 261
disorder n/a 37 38
disorder n/a 49 59
disorder n/a 61 79
low_complexity n/a 78 91
disorder n/a 81 88
disorder n/a 91 94
disorder n/a 107 108
disorder n/a 111 112
low_complexity n/a 121 137
low_complexity n/a 178 187
disorder n/a 193 194
Pfam A Ribos_L4_asso_C 272 352
disorder n/a 300 301
disorder n/a 306 313
disorder n/a 346 347
disorder n/a 350 357

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P10664. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSRPQVTVHS LTGEATANAL PLPAVFSAPI RPDIVHTVFT SVNKNKRQAY
50
51
AVSEKAGHQT SAESWGTGRA VARIPRVGGG GTGRSGQGAF GNMCRGGRMF
100
101
APTKTWRKWN VKVNHNEKRY ATASAIAATA VASLVLARGH RVEKIPEIPL
150
151
VVSTDLESIQ KTKEAVAALK AVGAHSDLLK VLKSKKLRAG KGKYRNRRWT
200
201
QRRGPLVVYA EDNGIVKALR NVPGVETANV ASLNLLQLAP GAHLGRFVIW
250
251
TEAAFTKLDQ VWGSETVASS KVGYTLPSHI ISTSDVTRII NSSEIQSAIR
300
301
PAGQATQKRT HVLKKNPLKN KQVLLRLNPY AKVFAAEKLG SKKAEKTGTK
350
351
PAAVFTETLK HD                                         
362
 

Show the unformatted sequence.

Checksums:
CRC64:37D0942A10AAE89F
MD5:2c5c81bd1791981b961a0b690f2ed69b

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribos_L4_asso_C 272 - 275 3O58 D 272 - 275 Jmol AstexViewer SPICE
3O5H D 272 - 275 Jmol AstexViewer SPICE
295 - 352 3IZS D 295 - 352 Jmol AstexViewer SPICE
Ribosomal_L4 20 - 261 3IZS D 20 - 261 Jmol AstexViewer SPICE
3O58 D 20 - 261 Jmol AstexViewer SPICE
3O5H D 20 - 261 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.