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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: HEMA_I78A9 (P11133)

Summary

This is the summary of UniProt entry HEMA_I78A9 (P11133).

Description: Hemagglutinin (Fragment)
Source organism: Influenza A virus (strain A/Swine/Hong Kong/81/1978 H3N2) (NCBI taxonomy ID 384484)
Length: 550 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 2
Pfam A Hemagglutinin 13 550
disorder n/a 191 200
disorder n/a 206 211
disorder n/a 213 218
disorder n/a 280 282
disorder n/a 319 320
disorder n/a 361 365
coiled_coil n/a 385 405
transmembrane n/a 514 538

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P11133. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
QDLPGTDNST ATLCLGHHAV PNGTIVKTIT DDQIEVTNAT ELVQSSSTGK
50
51
ICNNPHKILD GIDCTLIDAL LGDPHCDVFQ DETWDLFVER SNAFSNCYPY
100
101
DVPDYASLRS LVASSGTLEF ITEGFTWTGV TQNGGSNACK RGPANGFFSR
150
151
LNWLTKSGST YPVLNVTMPN NDNSDKLYIW GVHHPSTNQE QTNLYVQASG
200
201
RVTVSTKRSQ QTMIPNAGSR PWVRGLSSRI SIYWTIVKPG DILVINSNGN
250
251
LIAPRGYFKM RTGKSSIMRS DAPIGTCSSE CITPNGSIPN DKPFQNVNKI
300
301
TYGACPKYVK QNTLKLATGM RNVPEKQTRG LFGAIAGFIE NGWEGMIDGW
350
351
YGFRHQNSEG TGQAADLKST QAAIDLINGK VNRVIEKTNE KFHQIEKEFS
400
401
EVEGRIQDLE KYVEDTKIDL WSYNADVLVA LENQHTIDLT DSEMNKLFEK
450
451
TRRQLRENAE DMGNGCFKIY HKCDNACIES IRNGTYDHDI YRDEALNNRF
500
501
QIKGVELKSG YKDWILWISF AISCFLLCVV LLGFIMWACQ RGNIRCNICI
550
551
                                                      
550
 

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Checksums:
CRC64:1F2A7E758C531CE8
MD5:660e4e248355ea3925b1347fd36a1592

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Hemagglutinin 306 - 318 1R5I C 306 - 318 Jmol AstexViewer SPICE
G 306 - 318 Jmol AstexViewer SPICE