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65  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL4_HALMA (P12735)

Summary

This is the summary of UniProt entry RL4_HALMA (P12735).

Description: 50S ribosomal protein L4P
Source organism: Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) (NCBI taxonomy ID 272569)
View Pfam proteome data.
Length: 246 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 23
Pfam A Ribosomal_L4 16 246
disorder n/a 29 30
disorder n/a 32 105
low_complexity n/a 109 127
disorder n/a 123 124
disorder n/a 126 128
disorder n/a 131 132
disorder n/a 134 136
disorder n/a 168 181
disorder n/a 205 212
disorder n/a 214 229

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P12735. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQATIYDLDG NTDGEVDLPD VFETPVRSDL IGKAVRAAQA NRKQDYGSDE
50
51
YAGLRTPAES FGSGRGQAHV PKQDGRARRV PQAVKGRSAH PPKTEKDRSL
100
101
DLNDKERQLA VRSALAATAD ADLVADRGHE FDRDEVPVVV SDDFEDLVKT
150
151
QEVVSLLEAL DVHADIDRAD ETKIKAGQGS ARGRKYRRPA SILFVTSDEP
200
201
STAARNLAGA DVATASEVNT EDLAPGGAPG RLTVFTESAL AEVAER    
246
 

Show the unformatted sequence.

Checksums:
CRC64:4BCA2FE20EE24EDF
MD5:405c6824aa7f907b3858c6da619176a2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L4 16 - 246 1JJ2 C 16 - 246 Jmol AstexViewer SPICE
1K73 E 16 - 246 Jmol AstexViewer SPICE
1K8A E 16 - 246 Jmol AstexViewer SPICE
1K9M E 16 - 246 Jmol AstexViewer SPICE
1KC8 E 16 - 246 Jmol AstexViewer SPICE
1KD1 E 16 - 246 Jmol AstexViewer SPICE
1KQS C 16 - 246 Jmol AstexViewer SPICE
1M1K E 16 - 246 Jmol AstexViewer SPICE
1M90 E 16 - 246 Jmol AstexViewer SPICE
1N8R E 16 - 246 Jmol AstexViewer SPICE
1NJI E 16 - 246 Jmol AstexViewer SPICE
1Q7Y E 16 - 246 Jmol AstexViewer SPICE
1Q81 E 16 - 246 Jmol AstexViewer SPICE
1Q82 E 16 - 246 Jmol AstexViewer SPICE
1Q86 E 16 - 246 Jmol AstexViewer SPICE
1QVF C 16 - 246 Jmol AstexViewer SPICE
1QVG C 16 - 246 Jmol AstexViewer SPICE
1S72 C 16 - 246 Jmol AstexViewer SPICE
1VQ4 C 16 - 246 Jmol AstexViewer SPICE
1VQ5 C 16 - 246 Jmol AstexViewer SPICE
1VQ6 C 16 - 246 Jmol AstexViewer SPICE
1VQ7 C 16 - 246 Jmol AstexViewer SPICE
1VQ8 C 16 - 246 Jmol AstexViewer SPICE
1VQ9 C 16 - 246 Jmol AstexViewer SPICE
1VQK C 16 - 246 Jmol AstexViewer SPICE
1VQL C 16 - 246 Jmol AstexViewer SPICE
1VQM C 16 - 246 Jmol AstexViewer SPICE
1VQN C 16 - 246 Jmol AstexViewer SPICE
1VQO C 16 - 246 Jmol AstexViewer SPICE
1VQP C 16 - 246 Jmol AstexViewer SPICE
1W2B C 16 - 246 Jmol AstexViewer SPICE
1YHQ C 16 - 246 Jmol AstexViewer SPICE
1YI2 C 16 - 246 Jmol AstexViewer SPICE
1YIJ C 16 - 246 Jmol AstexViewer SPICE
1YIT C 16 - 246 Jmol AstexViewer SPICE
1YJ9 C 16 - 246 Jmol AstexViewer SPICE
1YJN C 16 - 246 Jmol AstexViewer SPICE
1YJW C 16 - 246 Jmol AstexViewer SPICE
2OTJ C 16 - 246 Jmol AstexViewer SPICE
2OTL C 16 - 246 Jmol AstexViewer SPICE
2QA4 C 16 - 246 Jmol AstexViewer SPICE
2QEX C 16 - 246 Jmol AstexViewer SPICE
3CC2 C 16 - 246 Jmol AstexViewer SPICE
3CC4 C 16 - 246 Jmol AstexViewer SPICE
3CC7 C 16 - 246 Jmol AstexViewer SPICE
3CCE C 16 - 246 Jmol AstexViewer SPICE
3CCJ C 16 - 246 Jmol AstexViewer SPICE
3CCL C 16 - 246 Jmol AstexViewer SPICE
3CCM C 16 - 246 Jmol AstexViewer SPICE
3CCQ C 16 - 246 Jmol AstexViewer SPICE
3CCR C 16 - 246 Jmol AstexViewer SPICE
3CCS C 16 - 246 Jmol AstexViewer SPICE
3CCU C 16 - 246 Jmol AstexViewer SPICE
3CCV C 16 - 246 Jmol AstexViewer SPICE
3CD6 C 16 - 246 Jmol AstexViewer SPICE
3CMA C 16 - 246 Jmol AstexViewer SPICE
3CME C 16 - 246 Jmol AstexViewer SPICE
3CPW C 16 - 246 Jmol AstexViewer SPICE
3CXC C 16 - 246 Jmol AstexViewer SPICE
3G4S C 16 - 246 Jmol AstexViewer SPICE
3G6E C 16 - 246 Jmol AstexViewer SPICE
3G71 C 16 - 246 Jmol AstexViewer SPICE
3I55 C 16 - 246 Jmol AstexViewer SPICE
3I56 C 16 - 246 Jmol AstexViewer SPICE
3OW2 C 16 - 246 Jmol AstexViewer SPICE