Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
45  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL11_HALMA (P14122)

Summary

This is the summary of UniProt entry RL11_HALMA (P14122).

Description: 50S ribosomal protein L11P
Source organism: Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) (NCBI taxonomy ID 272569)
View Pfam proteome data.
Length: 162 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L11_N 4 62
disorder n/a 4 33
low_complexity n/a 10 28
disorder n/a 35 38
disorder n/a 46 52
disorder n/a 59 63
disorder n/a 66 69
Pfam A Ribosomal_L11 67 135
disorder n/a 73 100
disorder n/a 135 137
disorder n/a 139 140
disorder n/a 142 148

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P14122. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAGTIEVLVP GGEANPGPPL GPELGPTPVD VQAVVQEIND QTAAFDGTEV
50
51
PVTVKYDDDG SFEIEVGVPP TAELIKDEAG FETGSGEPQE DFVADLSVDQ
100
101
VKQIAEQKHP DLLSYDLTNA AKEVVGTCTS LGVTIEGENP REFKERIDAG
150
151
EYDDVFAAEA QA                                         
162
 

Show the unformatted sequence.

Checksums:
CRC64:E64E6802B49208B8
MD5:f7117aaf808b29b5abf06569b2bef97d

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L11 67 - 130 2QA4 I 67 - 130 Jmol AstexViewer SPICE
67 - 135 1S72 I 71 - 139 Jmol AstexViewer SPICE
1VQ4 I 71 - 139 Jmol AstexViewer SPICE
1VQ5 I 71 - 139 Jmol AstexViewer SPICE
1VQ6 I 71 - 139 Jmol AstexViewer SPICE
1VQ7 I 71 - 139 Jmol AstexViewer SPICE
1VQ8 I 71 - 139 Jmol AstexViewer SPICE
1VQ9 I 71 - 139 Jmol AstexViewer SPICE
1VQK I 71 - 139 Jmol AstexViewer SPICE
1VQL I 71 - 139 Jmol AstexViewer SPICE
1VQM I 71 - 139 Jmol AstexViewer SPICE
1VQN I 71 - 139 Jmol AstexViewer SPICE
1VQO I 71 - 139 Jmol AstexViewer SPICE
1VQP I 71 - 139 Jmol AstexViewer SPICE
1YHQ I 66 - 134 Jmol AstexViewer SPICE
1YI2 I 66 - 134 Jmol AstexViewer SPICE
1YIJ I 66 - 134 Jmol AstexViewer SPICE
1YIT I 66 - 134 Jmol AstexViewer SPICE
1YJ9 I 66 - 134 Jmol AstexViewer SPICE
1YJN I 66 - 134 Jmol AstexViewer SPICE
1YJW I 66 - 134 Jmol AstexViewer SPICE
2OTJ I 71 - 139 Jmol AstexViewer SPICE
2OTL I 71 - 139 Jmol AstexViewer SPICE
2QEX I 71 - 139 Jmol AstexViewer SPICE
3CC2 I 66 - 134 Jmol AstexViewer SPICE
3CC4 I 66 - 134 Jmol AstexViewer SPICE
3CC7 I 66 - 134 Jmol AstexViewer SPICE
3CCE I 66 - 134 Jmol AstexViewer SPICE
3CCJ I 66 - 134 Jmol AstexViewer SPICE
3CCL I 66 - 134 Jmol AstexViewer SPICE
3CCM I 66 - 134 Jmol AstexViewer SPICE
3CCQ I 66 - 134 Jmol AstexViewer SPICE
3CCR I 66 - 134 Jmol AstexViewer SPICE
3CCS I 66 - 134 Jmol AstexViewer SPICE
3CCU I 66 - 134 Jmol AstexViewer SPICE
3CCV I 66 - 134 Jmol AstexViewer SPICE
3CD6 I 66 - 134 Jmol AstexViewer SPICE
3CMA I 66 - 134 Jmol AstexViewer SPICE
3CME I 66 - 134 Jmol AstexViewer SPICE
3G4S I 66 - 134 Jmol AstexViewer SPICE
3G6E I 66 - 134 Jmol AstexViewer SPICE
3G71 I 66 - 134 Jmol AstexViewer SPICE
3I55 I 66 - 134 Jmol AstexViewer SPICE
3I56 I 66 - 134 Jmol AstexViewer SPICE
79 - 88 1C04 C 18 - 27 Jmol AstexViewer SPICE
Ribosomal_L11_N 5 - 62 2QA4 I 5 - 62 Jmol AstexViewer SPICE