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65  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RLA0_HALMA (P15825)

Summary

This is the summary of UniProt entry RLA0_HALMA (P15825).

Description: 50S ribosomal protein L10E
Source organism: Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) (NCBI taxonomy ID 272569)
View Pfam proteome data.
Length: 348 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 15
Pfam A Ribosomal_L10 11 109
disorder n/a 52 54
disorder n/a 102 107
disorder n/a 110 114
disorder n/a 116 133
disorder n/a 135 139
disorder n/a 162 163
disorder n/a 170 171
disorder n/a 175 179
disorder n/a 213 215
disorder n/a 231 249
disorder n/a 252 261
disorder n/a 266 273
disorder n/a 277 279
disorder n/a 281 348
low_complexity n/a 303 343

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P15825. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSAESERKTE TIPEWKQEEV DAIVEMIESY ESVGVVNIAG IPSRQLQDMR
50
51
RDLHGTAELR VSRNTLLERA LDDVDDGLED LNGYITGQVG LIGTDDNPFS
100
101
LFQELEASKT PAPIGAGEVA PNDIVIPEGD TGVDPGPFVG ELQSVGADAR
150
151
IQEGSIQVLS DSTVLDTGEE VSQELSNVLN ELGIEPKEVG LDLRAVFADG
200
201
VLFEPEELEL DIDEYRSDIQ AAAGRAFNLS VNADYPTATT APTMLQSARG
250
251
NAKSLALQAA IEDPEVVPDL VSKADAQVRA LASQIDDEEA LPEELQGVEA
300
301
DVATEEPTDD QDDDTASEDD ADADDAAEEA DDDDDDDEDA GDALGAMF  
348
 

Show the unformatted sequence.

Checksums:
CRC64:4063B1C9D2FCB164
MD5:d8cd6fe09af1ad67fcd89cb2b78e2b6c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L10 11 - 109 2QA4 G 11 - 109 Jmol AstexViewer SPICE
12 - 73 1JJ2 G 12 - 73 Jmol AstexViewer SPICE
1K73 I 12 - 73 Jmol AstexViewer SPICE
1K8A I 12 - 73 Jmol AstexViewer SPICE
1K9M I 12 - 73 Jmol AstexViewer SPICE
1KC8 I 12 - 73 Jmol AstexViewer SPICE
1KD1 I 12 - 73 Jmol AstexViewer SPICE
1KQS G 12 - 73 Jmol AstexViewer SPICE
1M1K I 12 - 73 Jmol AstexViewer SPICE
1M90 I 12 - 73 Jmol AstexViewer SPICE
1N8R I 12 - 73 Jmol AstexViewer SPICE
1NJI I 12 - 73 Jmol AstexViewer SPICE
1Q7Y I 12 - 73 Jmol AstexViewer SPICE
1Q81 I 12 - 73 Jmol AstexViewer SPICE
1Q82 I 12 - 73 Jmol AstexViewer SPICE
1Q86 I 12 - 73 Jmol AstexViewer SPICE
1QVF G 12 - 73 Jmol AstexViewer SPICE
1QVG G 12 - 73 Jmol AstexViewer SPICE
1S72 G 12 - 73 Jmol AstexViewer SPICE
1VQ4 G 12 - 73 Jmol AstexViewer SPICE
1VQ5 G 12 - 73 Jmol AstexViewer SPICE
1VQ6 G 12 - 73 Jmol AstexViewer SPICE
1VQ7 G 12 - 73 Jmol AstexViewer SPICE
1VQ8 G 12 - 73 Jmol AstexViewer SPICE
1VQ9 G 12 - 73 Jmol AstexViewer SPICE
1VQK G 12 - 73 Jmol AstexViewer SPICE
1VQL G 12 - 73 Jmol AstexViewer SPICE
1VQM G 12 - 73 Jmol AstexViewer SPICE
1VQN G 12 - 73 Jmol AstexViewer SPICE
1VQO G 12 - 73 Jmol AstexViewer SPICE
1VQP G 12 - 73 Jmol AstexViewer SPICE
1YHQ G 12 - 73 Jmol AstexViewer SPICE
1YI2 G 12 - 73 Jmol AstexViewer SPICE
1YIJ G 12 - 73 Jmol AstexViewer SPICE
1YIT G 12 - 73 Jmol AstexViewer SPICE
1YJ9 G 12 - 73 Jmol AstexViewer SPICE
1YJN G 12 - 73 Jmol AstexViewer SPICE
1YJW G 12 - 73 Jmol AstexViewer SPICE
2OTJ G 12 - 73 Jmol AstexViewer SPICE
2OTL G 12 - 73 Jmol AstexViewer SPICE
2QEX G 12 - 73 Jmol AstexViewer SPICE
3CC2 G 12 - 73 Jmol AstexViewer SPICE
3CC4 G 12 - 73 Jmol AstexViewer SPICE
3CC7 G 12 - 73 Jmol AstexViewer SPICE
3CCE G 12 - 73 Jmol AstexViewer SPICE
3CCJ G 12 - 73 Jmol AstexViewer SPICE
3CCL G 12 - 73 Jmol AstexViewer SPICE
3CCM G 12 - 73 Jmol AstexViewer SPICE
3CCQ G 12 - 73 Jmol AstexViewer SPICE
3CCR G 12 - 73 Jmol AstexViewer SPICE
3CCS G 12 - 73 Jmol AstexViewer SPICE
3CCU G 12 - 73 Jmol AstexViewer SPICE
3CCV G 12 - 73 Jmol AstexViewer SPICE
3CD6 G 12 - 73 Jmol AstexViewer SPICE
3CMA G 12 - 73 Jmol AstexViewer SPICE
3CME G 12 - 73 Jmol AstexViewer SPICE
3CPW G 12 - 73 Jmol AstexViewer SPICE
3CXC G 12 - 73 Jmol AstexViewer SPICE
3G4S G 12 - 73 Jmol AstexViewer SPICE
3G6E G 12 - 73 Jmol AstexViewer SPICE
3G71 G 12 - 73 Jmol AstexViewer SPICE
3I55 G 12 - 73 Jmol AstexViewer SPICE
3I56 G 12 - 73 Jmol AstexViewer SPICE
3OW2 G 12 - 73 Jmol AstexViewer SPICE
12 - 74 1W2B G 12 - 74 Jmol AstexViewer SPICE